Pairwise Alignments

Query, 238 a.a., glycine/betaine ABC transporter permease from Pseudomonas simiae WCS417

Subject, 277 a.a., ABC transporter permease subunit from Methanococcus maripaludis S2

 Score = 90.1 bits (222), Expect = 4e-23
 Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 2/175 (1%)

Query: 46  LILVLVSMLAALVVGIPAGILLSRPNMVGRAERFMQIFNIGNTVPPLAVLAIALGVLGIG 105
           L L++ S L AL++GIP GI+ +R  +V        + ++  T+P LA L  A+   GIG
Sbjct: 94  LSLIITSTLIALLLGIPLGIVKARSKLVSTL--LDPMLDVMQTLPSLAYLIPAVLFFGIG 151

Query: 106 SGPAIFALFLASLLPIVRNTYEGLKNVQGSLKEAAVGIGMTPRQVLFRVELPNAVPIIIG 165
             P + A  + ++ P ++ T  G++ V   L E     G T  Q+L ++ELP AVP I+ 
Sbjct: 152 EVPGVIATVIFAMPPAIKLTALGIEQVSNELIEVGRAFGGTSWQILTKIELPTAVPSIMM 211

Query: 166 GVRVALAINVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLGAACTALLALLLD 220
           GV  A+ ++     +A  IG+  LG +I  GI   +    L        LA++ D
Sbjct: 212 GVNQAIMLSFSMVVIAGFIGSGGLGEVIISGIQRYSLAPALEAGIAVTFLAVIFD 266