Pairwise Alignments

Query, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

Subject, 283 a.a., Histidine ABC transporter, permease protein (TC 3.A.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  102 bits (254), Expect = 7e-27
 Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 5/184 (2%)

Query: 21  QHITLVGIAVILAILIGVPLGILMTRFPTLAGPLQASATVLLTVPSIALFGLLLPFYSKF 80
           Q + L+ +A ++++LIG+PLGIL  R   L   L     ++ T+PS   F  L+P    F
Sbjct: 94  QTLALMLVATLISVLIGIPLGILSARSNRLRSVLMPLLDIMQTMPS---FVYLIPVLMLF 150

Query: 81  GQGLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRLRMVELPIAV 140
           G  LG +PAI A  +Y+  P++R T L +  V+  + EA    G    Q+L  V+LP+A+
Sbjct: 151 G--LGKVPAIFATVIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLAL 208

Query: 141 PVILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVLVSLLAIFAD 200
           P I+AG+    +M + ++ IA+ IGA GLG  +L  I   ++   +   + + +LA+  D
Sbjct: 209 PSIMAGINQTTMMALSMVVIASMIGARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVID 268

Query: 201 LLLQ 204
            + Q
Sbjct: 269 RITQ 272