Pairwise Alignments

Query, 761 a.a., ligand-gated channel protein from Pseudomonas simiae WCS417

Subject, 752 a.a., TonB-dependent siderophore receptor from Pseudomonas stutzeri RCH2

 Score =  755 bits (1950), Expect = 0.0
 Identities = 396/766 (51%), Positives = 519/766 (67%), Gaps = 19/766 (2%)

Query: 1   MSRTITKIPASSPRMLASAIGVALSASAIAHQAQAAEDTEQKGQRNSISLGATSITGEEQ 60
           MSR   ++ A  PR+LASAIGVAL+A ++   AQ         +   ++L   ++ GE++
Sbjct: 1   MSRQSLEL-AQPPRVLASAIGVALTAFSVPSMAQTVPAASSPSEA-PVALDEVTVIGEQE 58

Query: 61  DNTSYQVEKASSQKYTAPLVDTPRSVTVVPQQVLKDTAATSLQDALRTVPGITFGAGEGG 120
              +Y+   ++S+KYTAPL +TP+SVTV+  QV++DT + +L DALRT  GITFGAGEGG
Sbjct: 59  Q--AYKAATSASKKYTAPLRETPKSVTVITDQVIRDTGSLTLVDALRTTSGITFGAGEGG 116

Query: 121 NPQGDRPFIRGFDAQGDTYLDGVRDTGGQSREIFDIESIEVSKGPNSSFGGRGSAGGSLN 180
           NP GDRP IRGF+A+ DT++DG+RD G Q+REIF++ESIEVSKGP S++ G GS GGSLN
Sbjct: 117 NPAGDRPIIRGFNAESDTFIDGLRDLGSQTREIFNVESIEVSKGPGSAYTGAGSTGGSLN 176

Query: 181 LVSKTPQARDFTNGGFTYGSDQTRRYVLDVNRQFLDDSAAFRLNLMSHEQNVAGRDAVNY 240
           L+SKT + RDF +   T GSDQTRRY LDVNR  L D+ A RLNLM HE NVAGRD V+ 
Sbjct: 177 LISKTAKQRDFGDASVTLGSDQTRRYTLDVNR-MLGDNVAGRLNLMKHEANVAGRDGVDV 235

Query: 241 DRWGVAPSLTFGLGTPTRVNLSYYHMESDDLPDSGIPYGYGSSTATAHVHDKPNDGGDSN 300
            RWGVAP++TFG  TPTR  LSYYH+E+DD+PD GIP     + AT     +     D +
Sbjct: 236 SRWGVAPTITFGFDTPTRATLSYYHLETDDMPDYGIPL----TVATPANPRREPVKVDRD 291

Query: 301 NFYGLKDRDFRKTRADISTFSIEHDLNDNMTLKNTLRHGSTGQDYILTQPDDSKFNVNRF 360
           NFYGLK RDFR++  D  T  +EHDLN+N+T+ NT R   T  DYI+T PDDS+ NV   
Sbjct: 292 NFYGLKSRDFRESTTDAGTIRLEHDLNENLTISNTARIARTTLDYIVTNPDDSRGNVPN- 350

Query: 361 GTVWRRANSRVSTTTTTTNQTDLFGSFQALGFKHSYSTGLEFTGEETRVSNYTISPNTNP 420
           G V R A SR S T +  NQTDL   F     +H+  TG+E +        Y ++P    
Sbjct: 351 GLVSRSAKSRNSNTQSWVNQTDLTARFDTGSIEHTLVTGVEISDVGVHNRPYVVTPGAGG 410

Query: 421 VCTVAKGSLGGQCTSLSNPNPDDAWTGSIARNYYGTATKATSRGAYVFDTIELDPKWLLN 480
                     G CTSLSNP+P DAWTGSIAR+   T T   +  AYVFDT++ + +W LN
Sbjct: 411 NSCTPAHLASGDCTSLSNPSPKDAWTGSIARSTATTDTDTETLAAYVFDTLKFNEQWSLN 470

Query: 481 VGLRYDTFDTVANTDSATG-RSKIKEDSQFFNWQAGLVWKPVENASIYASYATSATPAGG 539
           +GLRYD ++T     S  G  ++ +  + F+N+Q GLV+ P+ N SIYA+++TS+ P+G 
Sbjct: 471 MGLRYDDYETEQKAVSTAGVITRPENKNHFWNYQLGLVFNPLPNGSIYAAWSTSSNPSGE 530

Query: 540 LVGEGSDGNPLSAGAASSDLQPEETVNYELGTKWDLFHDRLSLTAAVFRTEKKNTRILVD 599
             GEG+D   LS G  +  L PE   NYE+GTKWD F +RL LTAA+FRTEK N R+   
Sbjct: 531 TGGEGADA--LSVG--NEILDPERNRNYEIGTKWDFFDERLGLTAALFRTEKTNARVTNA 586

Query: 600 ALTYQNAGESQVDGVELSASGKITDQWQVFAGYSYLDSELVKSGL----NGRNGVVSSGS 655
           +   ++ GE+QVDG+ELSA+G+ T  WQVFA Y+YLD+ELVKSG        N +   G 
Sbjct: 587 SGFQESIGETQVDGLELSATGQFTRNWQVFASYTYLDAELVKSGAANIGTRANPIYVEGL 646

Query: 656 NKGNQMPNTPKNTFSLWTTYDVTSKLTIGGGAFYVDQVYGDAGNTVYVPSYTRYDAMASY 715
             GN++P+TPK++FS W TY++T  LTIGGGA YVD  +GDA N + VP Y RYDAMA+Y
Sbjct: 647 YDGNEVPSTPKHSFSFWNTYNLTQDLTIGGGATYVDSRFGDAANNIEVPEYWRYDAMAAY 706

Query: 716 KLTKNVDLQLNVQNLTDKLYYDKAFSTHFANQAAGRTALLTTSFHF 761
           +++KN+DLQLNVQNLTDK Y+D+ + +H A+ AAGRTALL+T+FHF
Sbjct: 707 RVSKNLDLQLNVQNLTDKRYFDQVYGSHMAHVAAGRTALLSTNFHF 752