Pairwise Alignments

Query, 569 a.a., FruA from Pseudomonas simiae WCS417

Subject, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

 Score =  239 bits (609), Expect = 3e-67
 Identities = 143/329 (43%), Positives = 198/329 (60%), Gaps = 8/329 (2%)

Query: 231 VYKHLLTGVSFMLPMVVAGGLLIALSFMF-GITAFEEKGTLAAALKTVGDQAFMLMVPLL 289
           V +HLL G S M+P +VAGG+L++LS M  G  A  E+G LA  +  +G     L   +L
Sbjct: 178 VKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLAD-IAQMGIAGLTLFTVVL 236

Query: 290 AGYIAYSIADRPALAPGMIGGLLATT-LGAGFIGGIFAGFLAGYCVKLITRAVQLPQSLD 348
            GYIAYS+AD+P LAPGMIG  +A      GFIG I  GF AG+ V+ + R + LP S+ 
Sbjct: 237 GGYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLKR-IALPDSMS 295

Query: 349 ALKPILIIPLLASLFTGLAMIYLVGPPVARMLVGLTEFLNTMGTTNAVLLGILLGGMMCV 408
           +L  I I PL+ +  T  A+++L+G P+A  ++ L +FL +M  +  V+LG +LG M   
Sbjct: 296 SLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGAVLGAMTAF 355

Query: 409 DLGGPINKAAYAFSVGMLAAHSGAPIAATMAAGMVPPIGMGIATFLARRKFAQTEREAGK 468
           D+GGPINK A  F+   +       +     A   PP+GM +AT L+  KF + EREAGK
Sbjct: 356 DMGGPINKVATLFAQTQVNTQPWL-MGGVGIAICTPPLGMALATLLSPSKFKRDEREAGK 414

Query: 469 AAIILGMVFISEGAIPFAAKDPLRVIPASIAGGALAGALSMYFGCKLAAPHGGLAVLVIP 528
           AA I+GM+ ISEGAIPFAA DP RV+PA IAGG +   +   F     AP GG  VL + 
Sbjct: 415 AAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIVLPV- 473

Query: 529 NAMNHALLYLLAIVAGSLLTGLVYALIKR 557
             ++  L Y+L  +AG+L T L+   +K+
Sbjct: 474 --VDGKLGYILGTIAGALATALIAIALKK 500



 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 1/126 (0%)

Query: 80  STPAQALADVDAVLRRGAEEAQVYVATQQAAENAPRIVAITACPTGVAHTFMAAEALQQT 139
           +T   A+A    V  +  E+ Q    +    E    I+A+T+CP+GVAHTF+AA++L++ 
Sbjct: 490 ATALIAIALKKTVHEQDNEQGQSLAFSSVIGEGQADILAVTSCPSGVAHTFLAAKSLEKA 549

Query: 140 AKRLGYDLQVETQGSVGARTPLSPQAIAEADVVLLAADIEV-ATERFAGKKIYRCGTGIA 198
           A   G  ++VETQG+ G    ++ + +  A +V+ A D+ +   ERF   K+    T  A
Sbjct: 550 ACLAGVKIKVETQGANGIINRITAKDVQRAKLVIFAHDVAIKEPERFKHIKVIDVTTKDA 609

Query: 199 LKQSEA 204
           +  + A
Sbjct: 610 ILNAAA 615



 Score = 32.0 bits (71), Expect = 7e-05
 Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 6   VTACPNGMVTSVLCARLLDAAAQRQGWSTSVEVVDVQRPERQLSQATIDDAEWVLLVSST 65
           VT+CP+G+  + L A+ L+ AA   G    VE         +++   +  A+ V+     
Sbjct: 529 VTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVIFAHDV 588

Query: 66  PV-DMQRFVGKRVFQSTPAQALADVDAVLR 94
            + + +RF   +V   T   A+ +  A+++
Sbjct: 589 AIKEPERFKHIKVIDVTTKDAILNAAALVQ 618