Pairwise Alignments

Query, 952 a.a., fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components (from data) from Pseudomonas simiae WCS417

Subject, 400 a.a., bifunctional PTS fructose transporter subunit IIA/HPr protein from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (648), Expect = 1e-71
 Identities = 156/399 (39%), Positives = 215/399 (53%), Gaps = 28/399 (7%)

Query: 1   MLELTVEQISMGQVAVDKSAALHLLAEKLVADGLVAEGYLSGLQAREAQGSTFLGQGIAI 60
           MLELT + I + Q   +K AA+  LA  L A GLVAEGY  G+  REAQ ST+LG GIAI
Sbjct: 1   MLELTTQDIQLQQHFANKQAAIQGLAHALTAKGLVAEGYAQGMLNREAQHSTYLGNGIAI 60

Query: 61  PHGTPETRDQVFSTGVRLLQFPEGVDWGDGQIVYLAIGIAAKSDEHLRLLQLLTRALGET 120
           PHGT +TR+ V  TGV  + FP+G+DWGDG +VY+AIGIAAKSDEHL +L+ LTR L   
Sbjct: 61  PHGTTDTRELVKQTGVTAMHFPQGLDWGDGNLVYVAIGIAAKSDEHLGILKQLTRVLSAD 120

Query: 121 DLGQALRRAGSAEALLKLLQGAPQELA-LDAQMIGLGVSADDFEELVWRGARLLRQADCV 179
            + QAL++A +A+ ++ +++G  Q  A  DA +I L   A D  ++      LL+   C 
Sbjct: 121 GVEQALQQAKTAQQIIAIIKGEAQLTADFDASLIQLQFPASDMVQMSAVAGGLLKNTGCA 180

Query: 180 SNGFAAVLQQVDALPLGDGLWWLHSEQTVKRPGLAFVTPDKPMRYLGQPLNGLFCLASLG 239
            N F A L       LG GLW + S++ VKR G++ VT      Y  Q +  L   +   
Sbjct: 181 ENEFVADLVTKAPTHLGRGLWLVASDRAVKRTGMSIVTTANHCEYEQQAVKALIAFSVCN 240

Query: 240 EAHQTLLERLCALLIEGRGQEL-------------GRATSSRAVLEVLGGELPPDWPAAR 286
           + HQ LL  +   + E +  +L             G A  + A   +  G +  +  AA 
Sbjct: 241 DVHQPLLNTITQCVFEQKQDQLLQADVQQLLNLFSGNAEQTIAQRTIAVGTITEETIAAE 300

Query: 287 --------------ITLANAHGLHARPAKILAQLAKSFDGDLRVRIVDGPVGAVSVKSLS 332
                           + N+HGLHARP  +L   AK F+ ++RV  +DG    V+ KSL 
Sbjct: 301 TVAEPDSARAHTATFRIKNSHGLHARPGAMLVAEAKKFESNIRVSNLDGDGQVVNAKSLM 360

Query: 333 KLLSLGARRGQVLEFIAEPSIAGDALPALLAAVEEGLGE 371
           K+++LG +    L+F AE   A  AL AL  A+  GLGE
Sbjct: 361 KVIALGVKHNHQLQFTAEGPDAEAALQALGVAINAGLGE 399