Pairwise Alignments

Query, 331 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

 Score =  282 bits (721), Expect = 9e-81
 Identities = 158/327 (48%), Positives = 218/327 (66%), Gaps = 2/327 (0%)

Query: 1   MKLSDIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRH 60
           M L +IA+LAGVS TTASYVINGKA++ RIS  T  +V AVVE + F P+  A+ LR+ +
Sbjct: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60

Query: 61  TRTLGFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDDADSERQLLQLFRARRCDA 120
           +R+ G I+PDLEN SYAR+AKLLEQ +R  GYQ+LIA SDDD   E    +   +RR DA
Sbjct: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120

Query: 121 LFVASCLPASDDSYRELQAKGLPVIAIDRVMGADQFCSVVSDDRQACLQLTSSLLQPLPK 180
           LFVAS +P++ + Y +LQ  G PVIAIDR +  + F  V+S+D  A  +LT S+L     
Sbjct: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180

Query: 181 QIVLIGARPELSISQERAAGFREALEGFTGEVIVEHGEAFSRDCGRQLMEQLLQQLGHLP 240
            + L+GA PEL++S+ER  GF  A++       + +GE F+R+ GR++  + +     LP
Sbjct: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVAN-DQLP 239

Query: 241 DALVTTSYVLLQGVFDALHDFPLKSRPLRLGTFGDTQLLDFLPLPVNAMAQQHQLIAETA 300
           DA+V TSY LL+G+ D L + P   + +RL TFGD +LLDFLP+ VN++ QQ +LIA++A
Sbjct: 240 DAVVATSYTLLEGILDVLLEQPELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADSA 299

Query: 301 LRLALVAVEDEQYQPGVHAIGRTFKQR 327
           L LAL A   ++YQ G+  I R  K R
Sbjct: 300 LALALNA-SAKRYQTGIELIPRQLKVR 325