Pairwise Alignments

Query, 331 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 18/316 (5%)

Query: 3   LSDIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRHTR 62
           + D+AR AGVSV T S VIN   +  + S A+++ V + +   G+ PN  A  L ++ T 
Sbjct: 4   IKDVAREAGVSVATVSRVIN---KSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTN 60

Query: 63  TLGFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDDADSERQLLQLFRARRCDALF 122
           T+G ++ D+ +P +  + K ++  A   G  LLI +    A+ ER+ L+L    RCDAL 
Sbjct: 61  TIGVLVSDVSDPFFGTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSRCDALV 120

Query: 123 VAS-CLPASDDSYRELQAKGLPVIAIDRVMGADQFCSVVSDDRQACLQLTSSLLQPLPKQ 181
           + S  LP  +      + K L +I       AD+  S+  D+++     T  L++   + 
Sbjct: 121 IHSKALPNEELIEYANEVKTLVLINRHIPQLADRCISL--DNQKGAYLATDFLIRQGHRN 178

Query: 182 IVLIGARPELSISQERAAGFREALEGFTGEVIVEHGEAFSRDC--GRQLMEQLLQQLGHL 239
           I  I +  ++  + +R AG+++AL      +   + E  S D   G Q M  LL  +  L
Sbjct: 179 IACISSSHQIEDADQRIAGYQQALNEHGITLSSSYIEKASPDSEGGEQAMTNLL--VKSL 236

Query: 240 P-DALVTTSYVLLQGVFDAL----HDFPLKSRPLRLGTFGDTQLLDFLPLPVNAMAQQHQ 294
           P  A+V  +  +  G    L    H  P     + +  F D  +  +L   +  +    Q
Sbjct: 237 PFTAVVAYNDNMAAGALLVLEENGHSVP---EHVSVIGFDDALISRYLRPRLTTVRYPIQ 293

Query: 295 LIAETALRLALVAVED 310
           L+AE A +LAL    D
Sbjct: 294 LMAEKATQLALALATD 309