Pairwise Alignments

Query, 331 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 339 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  105 bits (261), Expect = 2e-27
 Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 14/307 (4%)

Query: 5   DIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRHTRTL 64
           D+A+ A VSV T S VING A    +S     R+   +   G+  N  A  L+   TRT+
Sbjct: 3   DVAKAAHVSVATVSAVINGSAP---VSPELRNRIEQAIGLIGYKRNAIARSLKLGTTRTV 59

Query: 65  GFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDDADSERQLLQLFRARRCDALFVA 124
           G ++ D+ NP +  +  +++      GY +++  +D+D   + + + L   R  D L +A
Sbjct: 60  GLMVADITNPFFTDVVAVIQDVLHRAGYAVMLCCNDEDVALQDEQIALLIDRSVDGLIIA 119

Query: 125 SCLPASDDS--YRELQAKGLPVIAIDRVMGADQFCSVVSDDRQACLQLTSSLLQPLPKQI 182
              PA DD    R + +  LP + IDR+       +VV D+R+A    T  +L    ++I
Sbjct: 120 ---PAGDDETLKRMIASANLPTVLIDRLCDGIDTDAVVLDNRRAVQDATIYMLGLGHRRI 176

Query: 183 VLIGARPELSISQERAAGFREALEGF---TGEVIVEHGEAFSRDCGRQLMEQLLQQLGHL 239
             I    + S  +ER AG+R ALE       E ++  G    +D     ++ L       
Sbjct: 177 GYISGSLDTSTGRERLAGYRAALEAAGLPCEEDLIRIGNFREKDAYTAALQLLTSP--ER 234

Query: 240 PDALVTTSYVLLQGVFDALHDFPLK-SRPLRLGTFGDTQLLDFLPLPVNAMAQQHQLIAE 298
           P A+ + + +++ GV  A+ D  L     + + +F D    D     +  +AQ  Q I E
Sbjct: 235 PTAIFSANNLMVIGVMKAIRDIGLHCPDDVSVASFDDFPWADVFQPHLTTIAQPVQAIGE 294

Query: 299 TALRLAL 305
            A +L L
Sbjct: 295 QAAQLVL 301