Pairwise Alignments

Query, 331 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 356 a.a., catabolite repressor protein from Sinorhizobium meliloti 1021

 Score =  114 bits (284), Expect = 5e-30
 Identities = 93/329 (28%), Positives = 157/329 (47%), Gaps = 24/329 (7%)

Query: 5   DIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEAHGFTPNPQAAGLRSRHTRTL 64
           D++ L+G S +T S V+NG   ++RI  +T E +R++ E H +T N QA GLRS  +  +
Sbjct: 13  DLSVLSGSSPSTVSAVLNGTWRKRRIKESTAELIRSLAETHQYTANRQARGLRSSRSGLV 72

Query: 65  GFILPDLENPSYARIAKLLEQGARARGYQLLIASSDDDADSERQLLQLFRARRCDALFVA 124
           G +LP  +N  ++ +A+  E   R++G   ++ S+  D + ER+  +   +   D LF+ 
Sbjct: 73  GLLLPVHDNRYFSSLAQTFEAHVRSKGQCPIVVSASRDPEEERRTAETLISYSIDELFI- 131

Query: 125 SCLPASDDSYREL-QAKGLPVIAIDRVMGADQFCSVVSDDRQACLQLTSSLL------QP 177
            C     D   E+ +A GL  I ID  +   +  SV+SD+ +    LT +++      +P
Sbjct: 132 -CGATDPDGVHEVCEAAGLRHINID--LPGTKVPSVISDNFEGGRLLTEAIIRHFPAERP 188

Query: 178 L-PKQIVLIGARPELSISQERAAGFREALEGFTG----EVIVEHGEAFSRDCGRQLMEQL 232
           L P  + L G R +   ++ER  GFR       G    E I   G  ++ D  R+  E  
Sbjct: 189 LEPDDLYLFGGRDD-HATRERIRGFRAVKSDLLGADPDECIWPTG--YAADNARKAFEAF 245

Query: 233 LQQLGHLPDALVTTSYVLLQGVFDALHDFPLKS-RPLRLGTFGDTQLLDFLPLPVNAMAQ 291
            +Q G LP      S +  +G+   + + PL++   L +G +       FLP PV  + Q
Sbjct: 246 YEQHGKLPRGFFVNSSINFEGLLRFMAEHPLENFTDLVVGCYDYDPFASFLPFPVIMIRQ 305

Query: 292 QHQLIAETALRLALVAVEDEQYQPGVHAI 320
                 E  +  A   +E+ +    +H I
Sbjct: 306 N----IEGMIAKAFEVIEEPRASLQIHMI 330