Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 560 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  228 bits (580), Expect = 8e-64
 Identities = 144/394 (36%), Positives = 210/394 (53%), Gaps = 6/394 (1%)

Query: 286 DFYDGVSRLMAQTYQLDDATLTFLGQQLEQRLAQNRTHMVVLVSALSAVFLLIFYLYAGF 345
           D      ++M Q   + D+    + +  +    Q  T   VL S +   F+    L  G 
Sbjct: 170 DLQKAYRKVMDQLTIMIDSNDRQISEDAKAATQQEVTAKTVLYSGIVVAFIAALLL--GM 227

Query: 346 YASTRTTLRRLGAMMD---KVAAGDMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVG 402
           + S R   R +   +D   ++A GD+T    + SRDE G L +        +   I+++ 
Sbjct: 228 FIS-RLISRPIAVAVDCAQRIAQGDLTQHITSNSRDEAGQLLKALGDMQTSLKTTIQQIA 286

Query: 403 HTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAH 462
               Q+   A ++  V+   ++A+  Q  +I+Q ATA+ +M+S  +EVAR+A +   ++ 
Sbjct: 287 SASDQLASAAEELTAVTDDGSRALIRQNDEIQQAATAVTEMTSAVEEVARNAVSTSQASQ 346

Query: 463 SVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNL 522
           S + +   GR   +S   +I     EI  S  ++  LA   + I  VL+VI+ IAEQTNL
Sbjct: 347 STSSQASEGRDQARSAVQAINTATQEITSSTGLVKDLAVQVRDIGKVLDVIRGIAEQTNL 406

Query: 523 LALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGS 582
           LALNAAIEAARAGEQGRGFAVVADEVR LA RTQ ST EIE MI  +Q    +AV AMG 
Sbjct: 407 LALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTGEIESMIHAVQDRADSAVDAMGK 466

Query: 583 SHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRA 642
           S  + + T   +    +ALE I   +  I D+N  IA A E+Q  VA ++D+N+V I   
Sbjct: 467 SQALVTETQDLARATGEALEQIADNISQINDRNLVIATASEEQAHVAREVDRNLVNIQDL 526

Query: 643 GEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
               A GA QT A+S++LS   +    L+G FR+
Sbjct: 527 STQTAAGANQTNASSQELSNLALSFNSLVGRFRL 560