Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  241 bits (615), Expect = 7e-68
 Identities = 159/377 (42%), Positives = 220/377 (58%), Gaps = 12/377 (3%)

Query: 310 GQQLEQRLAQNRTH-----MVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAM---MD 361
           G + +  L + + H     +++ +  ++AV LL+  +     A+    LR L  M   +D
Sbjct: 185 GIEAQVALVEAKVHDRVQGVILSIVGIAAVVLLVIAVVGLLLANA--ILRPLHLMKDNLD 242

Query: 362 KVAAG--DMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVS 419
            +AAG  D+T      S+DELG L   FN  V KIH L+ ++    SQ+     QV   +
Sbjct: 243 DIAAGEGDLTRRLTITSQDELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQA 302

Query: 420 AQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQ 479
            +S QA+  QR + +QVATA+N+MSS AQEVARSA  A  +A   ++E  S + +V    
Sbjct: 303 QRSEQAMERQRHETDQVATAINEMSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSI 362

Query: 480 GSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGR 539
             I  L  +I  S   ++ L  D  SI SVL VI+SIAEQTNLLALNAAIEAARAGE GR
Sbjct: 363 QQIHALVNDIRSSGVSLDSLQQDVASIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGR 422

Query: 540 GFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQ 599
           GFAVVADEVR LA RTQ ST+EI+ MI RLQSG  AAV+AM  S +   GT  ++     
Sbjct: 423 GFAVVADEVRALASRTQQSTQEIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGA 482

Query: 600 ALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQ 659
           +L+ +   +G I   N QIA+A E+QTAVA +I++++ +I  A +  A+        SR 
Sbjct: 483 SLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRS 542

Query: 660 LSLQVIELKQLIGAFRV 676
           L+     L +L+G FR+
Sbjct: 543 LADLGQRLGKLVGQFRI 559