Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  257 bits (657), Expect = 1e-72
 Identities = 152/375 (40%), Positives = 229/375 (61%), Gaps = 5/375 (1%)

Query: 304 ATLTFLGQQLEQRLAQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKV 363
           A L  L + L+ +   +   M ++   ++ + LL+ +L     A     L+++ AM+D +
Sbjct: 341 ADLQALQKDLDHQRQADIFGMAIVGLVIAGIGLLVIWLVGHGIARP---LKQMVAMLDDI 397

Query: 364 AAG--DMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQ 421
           A G  D+T   V+   DELG + + FN  ++K+  +I +V  +V  V   +     ++ +
Sbjct: 398 AQGEGDLTRRLVSDRADELGAIARGFNTFLSKLQGMITQVVTSVQSVSDSSEHTADIAIR 457

Query: 422 SNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGS 481
           +NQ V  Q  +I+QVATA+++M++TAQ+VAR+A  A  +A   +     G  +V+    S
Sbjct: 458 TNQGVHKQMSEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMQIVRDTSTS 517

Query: 482 IARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGF 541
           I  LA EI ++V V+  LA DS++I+++L  I+ IAEQTNLLALNAAIEAARAGEQGRGF
Sbjct: 518 IGALAVEIGKAVGVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGF 577

Query: 542 AVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQAL 601
           AVVADEVR LA++TQ +TEEI+ MI +LQ G    V+ M  S      +V  + +  QAL
Sbjct: 578 AVVADEVRNLAQKTQQATEEIQTMIQQLQQGTRDVVRVMEDSQTRTDESVQHAAKAAQAL 637

Query: 602 ENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLS 661
           E I  AV +I D N QIA+A E+Q+AVA DI++N++ I +     A GA ++ AAS  L+
Sbjct: 638 ETITQAVSVINDMNTQIASAAEEQSAVADDINRNVINIGQVANEVASGADESSAASAGLT 697

Query: 662 LQVIELKQLIGAFRV 676
               + ++LI  FRV
Sbjct: 698 KLAEQQRRLINQFRV 712