Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 640 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  238 bits (606), Expect = 8e-67
 Identities = 159/467 (34%), Positives = 257/467 (55%), Gaps = 31/467 (6%)

Query: 215 SSSTRFDELLQQLEKIQAEYGLKLQDALGSSKAAHAALDGLAKSSNASLKQGSELFEEQV 274
           +++ + +  L+ +E +   +G    D +   + A  A     ++  AS +   +  ++ +
Sbjct: 200 AATRQLENALKSIETLNGAFGPSYADTIKQLETALIAYRRSVQNFTASNQAIGKAVQDTI 259

Query: 275 VMAETLDAPWQDFYDGVSRLMAQTYQLDDATLTFLGQQLEQR--LAQNRTHMVVLVSALS 332
            + ET           ++RL  + Y    + L  LG +  Q   L  + T + +L+  L+
Sbjct: 260 DLGET-----------ITRLTDEMYA---SQLVSLGDESAQSRILQLSCTALAMLLGILA 305

Query: 333 AVFLLIFYLYAGFYASTRTTLRRLG---AMMDKVAAGDMTVTFVAQSRDELGDLGQVFNG 389
           A+ +            TR   R L    A++D++AAGD+T   V    DELG L Q    
Sbjct: 306 AMII------------TRQITRPLQDTLAVVDRIAAGDLTQGTVVTRGDELGVLQQGIQR 353

Query: 390 TVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQMSSTAQE 449
               + DLI  +   V+Q+   A ++  V+ Q++  V+ Q+ + +QVATAM +MS+T  E
Sbjct: 354 MGTTLRDLIGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKTETDQVATAMQEMSATVHE 413

Query: 450 VARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATDSQSISSV 509
           VAR+A  A + A   + +   G  +V      I RLA+E+ +SV  +++L  +S  I  +
Sbjct: 414 VARNAEQACTVASEADAQARIGDQVVAQAIVQIERLASEVGRSVDAMDELEQESARIGKI 473

Query: 510 LEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEIEQMISRL 569
           ++VI+++AEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA+RTQHSTEEIE +++ L
Sbjct: 474 MDVIRAVAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRGLAQRTQHSTEEIESLVAGL 533

Query: 570 QSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAVEQQTAVA 629
           Q+G       M +S ++   +V  + +   +L NI  AV  I   NQQIAAA  QQ++VA
Sbjct: 534 QNGTRQVSSIMRNSRELTDSSVELAGKAGISLGNITQAVSGIQAMNQQIAAAAVQQSSVA 593

Query: 630 HDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
            +I ++I+ +    E  A  + +T A+S +L+    +L+QL+  F+V
Sbjct: 594 EEISRSILNVRDVSEQTASASEETAASSIELARLGNQLQQLVSHFKV 640