Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 712 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas fluorescens FW300-N1B4

 Score =  236 bits (603), Expect = 2e-66
 Identities = 144/353 (40%), Positives = 207/353 (58%), Gaps = 2/353 (0%)

Query: 324 MVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKVAAGDMTVTFVAQSRDELGDL 383
           ++V V+A  A  LLI+   +G      +    L A+      GD+T       +DELG+L
Sbjct: 362 VLVAVAAGLAGLLLIWLTASGVTRPINSVAEMLKAIAS--GDGDLTQRLHYSKKDELGEL 419

Query: 384 GQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQM 443
              FN  + K+   I ++  +++     A Q   ++ Q+++ +  Q  +I+QVATA N+M
Sbjct: 420 VSWFNRFLDKLQPTIAQIKQSITDARGTADQSSEIARQTSEGMQVQFREIDQVATASNEM 479

Query: 444 SSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATDS 503
           S+TA +VA SA+ A ++A   +     G S+++     I +LA E+ ++V  +  LA +S
Sbjct: 480 SATAHDVANSASNAANAAKGADQSARDGMSIIERSTRDINQLAEEVSKAVTEVEALAVNS 539

Query: 504 QSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEIE 563
           + I SVLEVI+SIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA+RTQ S EEI 
Sbjct: 540 EQIGSVLEVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIR 599

Query: 564 QMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAVE 623
            +I R+Q+G    V  M SS   A    GQ ++  QAL  I  AV +I D N QIA+A E
Sbjct: 600 IVIERIQTGTRGVVATMHSSQTQAHSNAGQIQQAVQALSKISDAVTVISDMNLQIASAAE 659

Query: 624 QQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
           QQ+AVA ++++N+  I    E     A ++   S QL+    +  +L+  FRV
Sbjct: 660 QQSAVAEEVNRNVSAIRTVTETLTGQATESAQISSQLNSLTTQQMKLMDQFRV 712