Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 648 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N1B4

 Score =  219 bits (557), Expect = 4e-61
 Identities = 139/386 (36%), Positives = 213/386 (55%), Gaps = 3/386 (0%)

Query: 293 RLMAQTYQLDDATLTFLGQQLEQRLAQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRTT 352
           R MA  +  +    TF+G   +  +  + T +  L++ ++AV  + F +    +AS    
Sbjct: 262 RYMANVWPSEQLGWTFIGLIKQTDVMSSATQLTWLIAIIAAVLAVFFAIVGASFASLIVR 321

Query: 353 -LRRLGAMMDKVAAG--DMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVE 409
            +R + + ++ +A G  D+T     +  DE   L   FN  +  I +LI+ +G   +++ 
Sbjct: 322 PIRSVASGLEGIAQGEGDLTKNLQIRGSDETAQLANWFNQFLTAIRNLIQSIGGAATKIL 381

Query: 410 LQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETV 469
             +     VS+   +A   QR  ++ V+TA ++M +TA EVARS + A  SA S   +  
Sbjct: 382 ATSQSSTQVSSDMAEAAGRQREAVDMVSTAFHEMVATANEVARSCSQAAESADSGQRQAR 441

Query: 470 SGRSLVQSQQGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAI 529
            G+  + +   S+ RL+ EI+QS Q + QL  DS  I S+L  I+SIAEQTNLLALNAAI
Sbjct: 442 EGQQQIDAAVSSVDRLSQEIEQSAQSMQQLERDSNDIQSILGTIRSIAEQTNLLALNAAI 501

Query: 530 EAARAGEQGRGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASG 589
           EAARAGEQGRGFAVVADEVR LA+RT  ST EI+ ++  L    +   + M +S +++  
Sbjct: 502 EAARAGEQGRGFAVVADEVRALAKRTADSTAEIDGLLGNLAKRTSQVTQQMHASLEVSQQ 561

Query: 590 TVGQSERVQQALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEG 649
           +V +    + +   I  +V +I D N QIA A EQQ  VA DI+++I +I+   +  AE 
Sbjct: 562 SVTRIGEARSSFGQIRESVDVIRDMNTQIATAAEQQHQVAEDINRHISQIHGDAQLVAEL 621

Query: 650 AYQTEAASRQLSLQVIELKQLIGAFR 675
           A      S+ L+    EL  L+  FR
Sbjct: 622 ANSARLDSQSLAGLSNELDGLVRRFR 647