Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  241 bits (614), Expect = 1e-67
 Identities = 191/632 (30%), Positives = 313/632 (49%), Gaps = 51/632 (8%)

Query: 74  NNQVQINATLGQSGKAGDLEGKISALEQSVLSRLQSL----NAMATE--PEQIAAFDAKR 127
           N    + + + +SG   ++      L    ++RLQ +    +A +TE   + +  + A++
Sbjct: 31  NGWGSLGSVIQRSGWMTEISLLNKTLTDLRIARLQFMLANGDAESTERLDKNLGIYLAQQ 90

Query: 128 DELIAAFKAQQQETSLLSKSALIGKLLNKAQMLSQIIASQAGLSRDSQSDLRQLSELITS 187
            +L+  FK       L  ++    +  N    + +  A   G          +L EL   
Sbjct: 91  TQLLNTFKNPINVAQLKEQAGYNAQYQNSLNDMRKAYAQANGARTTIDGAATRLGELTAG 150

Query: 188 VTPLVTQTLGEGRAMGAYSLGQGFLNSSSSTRFDELL---QQLEKIQ-AEYGLKLQDALG 243
           VT  V Q                 L      RF +LL   Q  E +Q A+Y L++  A  
Sbjct: 151 VTNHVLQ-----------------LPDYEEDRFAQLLAISQIKEDVQRAQYLLRVYMAAP 193

Query: 244 SS---KAAHAALD-----------GLAKSSNASLKQGSELFEEQVVMAETLDAPWQDFYD 289
           ++   KA +  LD            L  +S A+L+Q   + +E     + L+   Q    
Sbjct: 194 ANDAVKAIYTQLDTAQATLGRHAGALDANSGAALQQIRTVLDEYRSAIQALETATQAIAK 253

Query: 290 GVSRLMAQTYQL---DDATLTFLGQQLEQRLAQNRTHMVVLVSALSAVFLLIFYLYAGFY 346
               +  Q  ++    D+   F   +L+   +  R+ ++V     S +  L+  + A + 
Sbjct: 254 ARQEMTDQQKEIVRISDSLYQFQLDRLDVESSDARSRLIV-----STLLALVLGVLAAWL 308

Query: 347 ASTRTTL--RRLGAMMDKVAAGDMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHT 404
            + +  L  R   A ++++A+GD++ T   Q RDELG L +      + + +LI  +   
Sbjct: 309 ITRQIILPLRTTMADVERIASGDLSETAQIQRRDELGVLQRGIQQMGSTLRELIGGIRDG 368

Query: 405 VSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSV 464
           VSQ+   A ++  V+ Q++  V+ Q+ + +QVATAM++MS+T QEVAR+A  A  +A   
Sbjct: 369 VSQISAAAEELSAVTQQTSAGVNSQKEETDQVATAMHEMSATVQEVARNAEQAALAATEA 428

Query: 465 NDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLA 524
           + E   G  +V      I R+A+ + +S + +  L  +S  I SV+ VI+++AEQTNLLA
Sbjct: 429 DSEAREGDRVVTEVVTQIERMASAVVRSTEAMTALQEESDKIGSVMNVIRAVAEQTNLLA 488

Query: 525 LNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSH 584
           LNAAIEAARAGE GRGFAVVADEVR LA+RTQ STEEIE +++ LQ+G       M +S 
Sbjct: 489 LNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAALQNGTQQVASIMHTSR 548

Query: 585 DMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGE 644
           D+    V  + R   +L +I   V  I   NQQIAAA E+Q+AVA +I +++V +    E
Sbjct: 549 DLTDSGVELARRAGASLGSITRTVSNIQAMNQQIAAAAEEQSAVAEEISRSVVNVRDVSE 608

Query: 645 HAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
             A  + +T A+S +L+    +L+ ++  FR+
Sbjct: 609 QTAAASEETAASSTELARLGGQLQMMVSRFRL 640