Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  234 bits (597), Expect = 9e-66
 Identities = 183/555 (32%), Positives = 273/555 (49%), Gaps = 33/555 (5%)

Query: 148 ALIGKLLNKAQMLSQIIASQAGLSRDSQSDLRQLSELITSVTPLVTQTLGEGRAMGAYSL 207
           A + +LL +  + S  + S  G  +D    +R   E+     P       +  A G  +L
Sbjct: 82  ARVAELLEQKALASTFMFSYLG-GQDGSFLMRPAEEMPADYDPRARPWYKDAIAAGGSTL 140

Query: 208 GQGFLNSSS-------STRFDELLQQLEKIQAEYGLKLQ----DALGSSKAAHAAL---D 253
            + +++++S       +T   +  + +  +  + GLK+     +AL  +   HA L   D
Sbjct: 141 TEPYVDAASGELVISIATPAQQNGRNIGVVGGDLGLKVLVEIINALDFNGMGHAFLVSGD 200

Query: 254 G---LAKSSNASLKQGSELFEEQVVMAETLDAPWQDF-YDGVSRLMA-QTYQLDDATLTF 308
           G   +    +  +K   ELF        +LDA + +   DG +R+++    Q   +   +
Sbjct: 201 GKILVHPDGSKVMKSLGELFPGHT---PSLDANYSEAELDGQTRILSFSRVQGLPSVSWY 257

Query: 309 LGQQLEQR-----LAQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKV 363
           +G  L++      LA  RT  VV  +AL+AV +++  L        R  L  +G  M  +
Sbjct: 258 VGISLDKAKAYAALASFRTSAVV--AALTAVGVILLLLGMLMRVLMRP-LTDMGRAMANI 314

Query: 364 AAG--DMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQ 421
           A G  D+T     QS+DE G+L   FN  V +IH  I  V     QV   A +V   S  
Sbjct: 315 AEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREVSSATQQVNEVAARVLAASNS 374

Query: 422 SNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGS 481
           S      Q  +   VA A+N++ + AQE+AR+AA A   A     +   GR +V+    +
Sbjct: 375 SMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQQASGARHQAEDGRQVVEQNIAA 434

Query: 482 IARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGF 541
           +  L+ +I  S   I  L   +  I  +LEVIK I+EQTNLLALNAAIEAARAGE GRGF
Sbjct: 435 MRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGF 494

Query: 542 AVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQAL 601
           AVVADEVR LA RTQ S +EI+QMI +LQ G  A+V+ M  S   +  +V  ++R  + L
Sbjct: 495 AVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMTESQRQSESSVSIADRAGERL 554

Query: 602 ENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLS 661
             +   +G I   NQ +A A E+QTAV   ++ +I EIN   +   E    T  A   L 
Sbjct: 555 GEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEINTLNQQGVENLQSTLRACGDLD 614

Query: 662 LQVIELKQLIGAFRV 676
            Q   LKQL+ +FR+
Sbjct: 615 QQARRLKQLVDSFRI 629