Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  253 bits (646), Expect = 2e-71
 Identities = 154/378 (40%), Positives = 231/378 (61%), Gaps = 13/378 (3%)

Query: 303 DATLTFLGQQLEQRLAQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRTT--LRRLGAMM 360
           D  +  LG++    LA     M+V+   ++   LL  +L      S R T  LR +  M+
Sbjct: 341 DQLMVALGEESRSNLAA----MLVIGMLIAFAGLLAIWLI-----SRRITRPLRDMVVML 391

Query: 361 DKVAAG--DMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETV 418
           D ++ G  D+T      SR+ELG +   FN  +A++  +I  V  +V +V   +     +
Sbjct: 392 DNISQGEGDLTQRLNIDSRNELGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADI 451

Query: 419 SAQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQ 478
           + ++++ V  Q  +IE VATA+++M++TAQ+VAR+A  A  +A++ +     GR +VQ  
Sbjct: 452 AIRTDKGVQTQLAEIELVATAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDT 511

Query: 479 QGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQG 538
             +IA LA+EI ++V V+  LA DS++I ++L  I+SIAEQTNLLALNAAIEAARAGEQG
Sbjct: 512 GATIAELASEIGRAVDVVQTLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQG 571

Query: 539 RGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQ 598
           RGFAVVADEVR LA++TQ +T EI+QMI +LQ G    V+ M  S +    +V Q++   
Sbjct: 572 RGFAVVADEVRNLAQKTQQATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAA 631

Query: 599 QALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASR 658
           +AL+ I  AV +I D N QIA+A E+Q+AVA DI++N+  I +  +  A GA +   AS 
Sbjct: 632 EALQAITQAVSLINDMNNQIASAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQASA 691

Query: 659 QLSLQVIELKQLIGAFRV 676
            L+    + ++LI  FRV
Sbjct: 692 GLTRLAEQQRRLINQFRV 709