Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  222 bits (566), Expect = 3e-62
 Identities = 136/356 (38%), Positives = 203/356 (57%), Gaps = 10/356 (2%)

Query: 324 MVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLG---AMMDKVAAGDMTVTFVAQSRDEL 380
           +V ++ A  A  +L   L       TR+ ++ L     + + +A GD+T  F     DE 
Sbjct: 191 VVAMILAFIATIILAMLL-------TRSIVQPLAEAVGVAEVIAGGDLTRHFQVVGSDEP 243

Query: 381 GDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAM 440
             L          + + I+ +  + +Q+   A ++  V+  S + +  Q  +IEQ ATA+
Sbjct: 244 ARLLSALQAMQRSLRETIQGISDSSNQLASAAEELNVVTEDSTRGLHQQNHEIEQAATAV 303

Query: 441 NQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLA 500
           N+M++   EVAR+A A   ++   ++    GR  V     SI  LA ++ Q+   + +LA
Sbjct: 304 NEMTAAVDEVARNAVATSEASRESDETAQHGRQQVIRTVDSIGLLADDVTQTATEVERLA 363

Query: 501 TDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTE 560
              + IS VL+VI+SIAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA RTQ ST+
Sbjct: 364 GQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQ 423

Query: 561 EIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAA 620
           EIEQMI  +  G   AV AM  S++ A  T+  +    +AL+ I  A+  I ++N  IA+
Sbjct: 424 EIEQMIGDVHQGTDKAVHAMQLSNERARTTLELARAAGEALDGIASAISQISERNLVIAS 483

Query: 621 AVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
           A E+Q  VA ++D+N+V I      ++ GA QT AAS++L+   I+L  L+  F+V
Sbjct: 484 ASEEQAQVAREVDRNLVNIRDLSLQSSAGANQTSAASQELARLAIDLNNLVARFQV 539