Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 673 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  238 bits (607), Expect = 7e-67
 Identities = 189/668 (28%), Positives = 313/668 (46%), Gaps = 18/668 (2%)

Query: 1   MKSLLYPAVALMNRLSFGMKFSLVSVLFLLPMLATNYYLVRDSWREYQGTRVELQSLDLL 60
           MK L  PA  LMNRL++  KF+L+ +L  L   +  + +     R      +E    +L+
Sbjct: 1   MKLLFSPAELLMNRLNYPSKFALIGLLVFLAFASLMWTIASQLNRT-----IERAENELV 55

Query: 61  GSSLA--LRRDLETLNNQVQINATLGQSGKAGDLEGKISALEQSVLSRLQSLNAMATEPE 118
            S+LA  L + +E       ++A L     A  +  + +AL+ SV + +  +N    + +
Sbjct: 56  ASALARPLSKLVELTQQHRGVSAILLGGNVA--MADRRTALQASVDAAVAEMNRTLADDK 113

Query: 119 QIAAF--DAKR--DELIAAFKAQQQETSLLSKSALIGKLLNKAQMLSQIIASQAGLSRDS 174
           +      D  R  DE+  + +   Q  S  + +ALIG+LLN   +LS       GL+ D 
Sbjct: 114 RAMREWQDISRGWDEIKRSVQGWSQPQSYQAHTALIGELLNFQTLLSDAY----GLTFDP 169

Query: 175 QSDLRQLSELITSVTPLVTQTLGEGRAMGAYSLGQGFLNSSSSTRFDELLQQLEKIQAEY 234
           +     L     +  P + + LG  R   +  L +G ++    T    + +++     E 
Sbjct: 170 EPQTYYLMTTAVNRLPFLIERLGRLRGSASAMLARGEISDEQRTALIVVTEEIRSATVEM 229

Query: 235 GLKLQDALGSSKAAHAALDGLAKSSNASLKQGSELFEEQVVMAETLDAPWQDFYDGVSRL 294
              ++  +         L+    +     +    + +  VV  +        F+D  +  
Sbjct: 230 ERSMEKVIAQRPELQTQLNRAVATLRERGEAVDRVVQGMVVRGDFSSTSSAQFFDMTTEA 289

Query: 295 MAQTY-QLDDATLTFLGQQLEQRLAQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRTTL 353
           +   Y Q+ D  L  L Q L+QR+   R  ++  ++ L  V  +I YL  G Y S  T++
Sbjct: 290 IGIGYTQMYDVLLPSLDQLLQQRIDDARQMLLGNLAMLLVVLAVIGYLSVGAYLSVMTSI 349

Query: 354 RRLGAMMDKVAAGDMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAG 413
           R L    +++AAGD+T      +RDEL  +   FN     +  LI  +      V   A 
Sbjct: 350 RSLRDGSERLAAGDLTAHIQLAARDELRYVAGSFNDMAEAMRQLIGSIKSNSDHVADSAR 409

Query: 414 QVETVSAQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRS 473
            + T S Q + A   Q      +A A+ QM+   + +AR+A  A + A+   + +  G  
Sbjct: 410 SLATASGQIHVASQCQSDAASSMAAAVEQMTVGIESIARNAGEADALANRSGELSRQGGE 469

Query: 474 LVQSQQGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAAR 533
           +V +    I+++A  +  S + + +L   S  IS+++ VI  IA QTNLLALNAAIEAAR
Sbjct: 470 IVAAVVEEISQIAISVGDSARTVAELGERSGQISAIVGVIGDIAAQTNLLALNAAIEAAR 529

Query: 534 AGEQGRGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQ 593
           AG+QGRGFAVVADEVR LA RT +ST+EI QM+S +Q G   AV+ M       +  V +
Sbjct: 530 AGDQGRGFAVVADEVRKLAERTANSTKEIAQMVSAIQQGTEGAVQGMEQGVAKVNEGVAR 589

Query: 594 SERVQQALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQT 653
           ++R  +A+  I  A   ++    +I+ A+ +Q+A + +I Q +  I R  E   E     
Sbjct: 590 AQRAGEAMGGIREAANQVLSTVAEISNALREQSAASAEIAQQVTTIARMAEENGEAVGTN 649

Query: 654 EAASRQLS 661
              + +LS
Sbjct: 650 HHTASRLS 657