Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 584 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  237 bits (605), Expect = 1e-66
 Identities = 148/362 (40%), Positives = 211/362 (58%), Gaps = 4/362 (1%)

Query: 319 QNRTHMVVLVSALSAVFLLIFYLYAGFYASTR--TTLRRLGAMMDKVAAGD--MTVTFVA 374
           Q R   +V +  +SA  LL+       + S    + L  +   +D +A GD  +T     
Sbjct: 223 QKRIDGLVTIMLVSAFALLVLMALLAIFMSNALLSPLLLIKRNLDDMAQGDGDLTQRLPI 282

Query: 375 QSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIE 434
            S+DELG+L   FN  V KIH L+++V  T +Q+    G V + + +S QA++ QR + +
Sbjct: 283 TSQDELGELAMSFNRFVEKIHSLVQQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETD 342

Query: 435 QVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQ 494
           QVATA+N+MS+ A EVA SA  A  +A   + + V+ + +V      I  L  E+  S +
Sbjct: 343 QVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGE 402

Query: 495 VINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARR 554
            +  L  D + I  VL+VI++IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA R
Sbjct: 403 SLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASR 462

Query: 555 TQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQ 614
           TQ ST EI+ MI RLQS  +  V  M  + +    T  Q+ +  ++L+ I   +G I   
Sbjct: 463 TQQSTGEIQGMIDRLQSATSNTVSTMLRAGEKGESTRDQANQAGESLDAISALIGTINSM 522

Query: 615 NQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAF 674
           N QIAAA E+QTAVA +I++++  I  A +  A  A Q    SR+L+     L++L+G F
Sbjct: 523 NAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTSRELNGLAERLQKLVGQF 582

Query: 675 RV 676
           R+
Sbjct: 583 RI 584