Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  228 bits (582), Expect = 5e-64
 Identities = 136/353 (38%), Positives = 206/353 (58%), Gaps = 1/353 (0%)

Query: 324 MVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKVAAGDMTVTFVAQSRDELGDL 383
           M++   A++A+F+ +    A   A     + +    + +   GD++     +  DE+  L
Sbjct: 293 MMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGR-GDGDLSQRIEVKGNDEIAQL 351

Query: 384 GQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQM 443
            + FNG + KIH  I+ V  T  ++++ A  V   +  ++     QR Q  QV TA+NQM
Sbjct: 352 SKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQM 411

Query: 444 SSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATDS 503
            +T  E+A +AA A  +A+  +     GR++V   + +I+RLA +I+ + +V+ QLA+ +
Sbjct: 412 GATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTT 471

Query: 504 QSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEIE 563
           Q I S+L+ I+ I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RT  STEEI+
Sbjct: 472 QEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQ 531

Query: 564 QMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAVE 623
           +MI++LQ+    AV AM +   +    V  S+   Q L +I   +  I D+N Q+A A E
Sbjct: 532 KMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATE 591

Query: 624 QQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
           +Q+ V H I+QNI EIN   E     A +   AS+ L      L +L+G F++
Sbjct: 592 EQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644