Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  213 bits (541), Expect = 2e-59
 Identities = 127/318 (39%), Positives = 183/318 (57%)

Query: 359 MMDKVAAGDMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETV 418
           +M KVA GD+T       +DELG + Q  N ++A +HD +     + S V   A ++ + 
Sbjct: 219 VMKKVAQGDLTAQIPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASS 278

Query: 419 SAQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQ 478
           + +++QAV  QR Q+ Q+ATAMNQM++T  +VA  A          + E   G   V S 
Sbjct: 279 AEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSS 338

Query: 479 QGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQG 538
             SI  L+ E+  +   +N+L      IS V  VI  I+EQTNLLALNAAIEAARAG+QG
Sbjct: 339 VDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQG 398

Query: 539 RGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQ 598
           RGFAVVADEVR LA RT HST+EI+ MI+RLQ    +   AM  S  +A+ +V  +E   
Sbjct: 399 RGFAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAG 458

Query: 599 QALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASR 658
             L  I+  +  + D+  QIA A E+Q+AVA ++++N+  IN A    ++ A      S 
Sbjct: 459 SDLSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESE 518

Query: 659 QLSLQVIELKQLIGAFRV 676
           +L+    +L Q + AF++
Sbjct: 519 KLADLSRQLDQKLTAFKL 536