Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  218 bits (554), Expect = 9e-61
 Identities = 141/354 (39%), Positives = 200/354 (56%), Gaps = 7/354 (1%)

Query: 327 LVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKVAAG--DMTVTFVAQSRDELGDLG 384
           +V+ + AV L+I  L        R  L  +G  M  +AAG  D+T   V +S+DE G LG
Sbjct: 279 IVATVIAVVLIILLLGMLLSVLLRP-LNLMGRAMHDIAAGEGDLTKRLVIESQDEFGHLG 337

Query: 385 QVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQMS 444
             FN  V +IHD +  V  +  Q+   A +V   S  S      Q  +   VA A+N++ 
Sbjct: 338 NGFNLFVERIHDSMREVASSTVQLNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINELG 397

Query: 445 STAQEVARSAAAAVSSAHSVNDETVS--GRSLVQSQQGSIARLATEIDQSVQVINQLATD 502
           +  QE+A++AA A  S HS +  T++  G+ +V     +++RL+  I  +   I  L T 
Sbjct: 398 AATQEIAQNAARA--SGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTK 455

Query: 503 SQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEI 562
           + +I  +L+VI  I++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ S  ++
Sbjct: 456 TANIGQILDVITGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAHRTQESASQV 515

Query: 563 EQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAV 622
           ++MI +LQSG   AV  M  S   +  TVG + +   +LE++   +G I   NQ +AAA 
Sbjct: 516 QEMIEQLQSGAREAVSIMNDSQRESVETVGIANKAVASLEHVTERIGEIDGMNQSVAAAT 575

Query: 623 EQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
           E+QTAV   I+ +I EIN   +   E    T  A   L  Q   L QL+G+FR+
Sbjct: 576 EEQTAVVEAINVDITEINTLNQQGVENLNATLRACTDLEQQSTRLTQLVGSFRI 629