Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 570 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  235 bits (599), Expect = 5e-66
 Identities = 144/354 (40%), Positives = 204/354 (57%), Gaps = 4/354 (1%)

Query: 326 VLVSALSAVFLLIFYLYAGFYASTRTTLRRLG---AMMDKVAAGDMTVTFVAQSRDELGD 382
           VL+  +  V   +  +  G    TR   R L    A   ++A GD+T   V+ S DE G 
Sbjct: 218 VLMLEIGVVIAFLVAIMLGVLI-TRMITRPLAVAVASAQRIAGGDLTQPIVSTSGDEAGQ 276

Query: 383 LGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQ 442
           L    +     + + I+++     Q+   A ++  V+ +S + ++ Q  +I+Q ATA+NQ
Sbjct: 277 LLNALSDMQGGLKNTIQQIASASDQLASAAEELSAVTDESTRGLTRQNDEIQQAATAVNQ 336

Query: 443 MSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATD 502
           M++  +EVAR+A +   ++ S  D+ V GR  V      I  +  EI  S   +++LA  
Sbjct: 337 MTAAVEEVARNAVSTSEASKSATDDAVDGRGQVDHTVKGITTMVHEITASTGAVSELAGH 396

Query: 503 SQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEI 562
            + IS VL+VI+SIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ ST EI
Sbjct: 397 VREISKVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQASTVEI 456

Query: 563 EQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAV 622
           E MIS +QSG   AV AMG S  +A+ T   + R   ALE I   V  I ++N  IA+A 
Sbjct: 457 EGMISTVQSGADGAVAAMGKSLSLATNTQELALRAGAALEKITLGVATINERNLVIASAS 516

Query: 623 EQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
           E+Q  VA ++D+N++ I      +A GA QT A+S++LS        L+  F++
Sbjct: 517 EEQAQVAREVDRNLINIQDLSTQSAAGANQTSASSQELSRLATSFNSLVANFKL 570