Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 542 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  230 bits (586), Expect = 1e-64
 Identities = 137/355 (38%), Positives = 201/355 (56%)

Query: 322 THMVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKVAAGDMTVTFVAQSRDELG 381
           T + +L + +   F++   L           LR    +  ++A+GD+T +  +   DE G
Sbjct: 188 TSVFMLTAGIVIAFVVAIMLGILITRMITRPLRSAIEVAQRIASGDLTQSVSSTRGDEAG 247

Query: 382 DLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMN 441
            L          +   I+ +     Q+   A ++  V+ +S + ++ Q  +I+Q ATA+N
Sbjct: 248 HLLNAIGTMQGNLKRTIQEISSASDQLASAAEELGAVTEESTRGLTRQNDEIQQAATAVN 307

Query: 442 QMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLAT 501
           +M++  +EVAR+A +    + S+  +  +GR  V +    I  + +EI +S   +  LA 
Sbjct: 308 EMTAAVEEVARNAVSTSEESKSLATDAANGRGQVDNTVKGIGTMVSEITESTGSVTTLAG 367

Query: 502 DSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEE 561
             + IS VLEVI+SIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ ST E
Sbjct: 368 HVRDISKVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQASTVE 427

Query: 562 IEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAA 621
           IE MI  +QSG   AV AM  S   A+ T   ++R   ALE I   VGMI ++N  IA+A
Sbjct: 428 IEGMIGTVQSGADGAVAAMSKSLATATNTQELAQRAGSALEKITSGVGMINERNMVIASA 487

Query: 622 VEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
            E+Q  VA ++D+N+V I      +A GA QT A+S++LS        ++  F++
Sbjct: 488 SEEQAQVAREVDRNLVNIQELSAQSAAGANQTSASSQELSRLATSFNTMVAQFKL 542