Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  236 bits (601), Expect = 3e-66
 Identities = 143/365 (39%), Positives = 215/365 (58%), Gaps = 7/365 (1%)

Query: 314 EQRLAQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRTT--LRRLGAMMDKVAAGDMTVT 371
           +Q  AQ RT  +        +  +I  + A    + + T  LR   A++D++A+GD+T T
Sbjct: 281 DQESAQARTTQITCT-----LLAIILGIIAAVIITRQITRPLRETLAVVDRIASGDLTQT 335

Query: 372 FVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRM 431
                 DELG L Q        + +LI  +  +V Q+   A ++  V+ Q++  V+ Q++
Sbjct: 336 LAVTRSDELGVLQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKV 395

Query: 432 QIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQ 491
           + +QVATAM++MS+T  EVAR+A  A  +A + + E   G  +V      I RLA E+ +
Sbjct: 396 ETDQVATAMHEMSATVAEVARNAEQASQAASNADREARDGDKVVGEAIAQIERLANEVGR 455

Query: 492 SVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 551
           SV  + +L  +S  I  V++VIK++AEQTNLLALNAAIEAARAGE GRGFAVVADEVR L
Sbjct: 456 SVDAMTELEQESDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGL 515

Query: 552 ARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMI 611
           A+RTQ ST EIE +++ LQSG       M +S ++   +V  S +   +L +I   V  I
Sbjct: 516 AQRTQQSTVEIETLVAALQSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSI 575

Query: 612 VDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLI 671
              NQQIAAA E+Q+AVA +I ++IV +    E  A  + +T A+S +L+    +L+ ++
Sbjct: 576 QAMNQQIAAAAEEQSAVAEEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTMV 635

Query: 672 GAFRV 676
             FR+
Sbjct: 636 SRFRI 640