Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  219 bits (558), Expect = 3e-61
 Identities = 133/359 (37%), Positives = 205/359 (57%), Gaps = 5/359 (1%)

Query: 318 AQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKVAAGDMTVTFVAQSR 377
           A  RT ++V+++ + AV +    +        + +L  +   ++ +A+GD+T        
Sbjct: 320 ASLRTLILVVIAIVVAVVISFAVV-----RPLKRSLDEVNGALNVLASGDLTHKLDDTGH 374

Query: 378 DELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVA 437
           DE  +L +  N  V  +  LI  +    +Q+   A +   +++Q+   +  Q+ Q++QVA
Sbjct: 375 DEFAELSRNCNRLVDSLRSLIASILDRSNQLAAAAEETSAITSQTTIGIQEQKSQVDQVA 434

Query: 438 TAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVIN 497
           TA  ++SS+A +V  SA  A+S     ++ET   R++    + +I  LA E+ ++ +VIN
Sbjct: 435 TATTELSSSAHQVNMSADDALSQIKQADEETQHMRTIADENKRTILSLADEVAKASKVIN 494

Query: 498 QLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQH 557
           ++ +DS SI S+L+VI+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RTQ 
Sbjct: 495 KVHSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQD 554

Query: 558 STEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQ 617
           ST EI+QMI  LQ G   AV  M    + A   V ++E+  QAL+ I  +V    D    
Sbjct: 555 STREIQQMIEVLQQGTQQAVAVMQLGQNQAQSCVEKTEQANQALQTISHSVHKAYDAGTH 614

Query: 618 IAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQLIGAFRV 676
           IA A ++Q  V+  + + +  I    E  A GA QT  +S +++    EL+  +  FRV
Sbjct: 615 IAQAAQEQNLVSQQVSEKLEHIAAISEETALGAEQTAKSSHEVARLAEELQSSVKEFRV 673