Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 666 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  216 bits (551), Expect = 2e-60
 Identities = 137/373 (36%), Positives = 202/373 (54%), Gaps = 4/373 (1%)

Query: 269 LFEEQVVMAETLDAPWQDFYDGVSRLMAQTYQLDDATLTFLGQQLEQRLAQNRTHMVVLV 328
           L ++   +A+T    W     G   L+   Y +++     L +  + RL     HM++++
Sbjct: 258 LSQDNQAIAKTSPEDWFKASTGRINLL---YSVENVLAKSLDELTDARLQTANWHMMLMM 314

Query: 329 SALSAVFLLIFYLYAGFYASTRTTLRRLGAMMDKVAAG-DMTVTFVAQSRDELGDLGQVF 387
           SAL+ V  L+  +          ++  +   M +     D++      S DELG LG  F
Sbjct: 315 SALAVVLFLVAMMGLSVMGYLNRSVVHIENQMRRAREEFDLSTRITLDSTDELGSLGNAF 374

Query: 388 NGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQRMQIEQVATAMNQMSSTA 447
           NG +     +I +V     +V     ++E+ S Q    V+    + EQVA+AM +MS+T 
Sbjct: 375 NGMMNDFEAVIHQVKTNSLKVTDAVKRMESHSNQMRHDVAQGHSEAEQVASAMTEMSATV 434

Query: 448 QEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEIDQSVQVINQLATDSQSIS 507
            ++A +A  A S++   N E  +G   V +   +I+ LA+EID +   I +L TD Q I 
Sbjct: 435 SQIASNAVEAASASGKANQEARTGNKEVGNTGKTISALASEIDAAAIAITKLDTDIQGIV 494

Query: 508 SVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLARRTQHSTEEIEQMIS 567
           SVLEVI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+R Q ST +I  M  
Sbjct: 495 SVLEVISGIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQRAQSSTTDIRTMTE 554

Query: 568 RLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGMIVDQNQQIAAAVEQQTA 627
           RL+ G   AV AM      A  +V +     + L  I+  V +I   N+QIAAA  +Q+A
Sbjct: 555 RLKEGARVAVDAMSRGQTQAQASVQEVNHAGEELRRIVDYVSVIDSMNEQIAAATHEQSA 614

Query: 628 VAHDIDQNIVEIN 640
           VA ++++N + I+
Sbjct: 615 VAEEVNRNALRIS 627