Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  242 bits (617), Expect = 4e-68
 Identities = 176/486 (36%), Positives = 248/486 (51%), Gaps = 27/486 (5%)

Query: 198 EGRAMGAYSLGQGFLNSSSSTRFDELLQQLEKIQAEYGLKL-QDALGSSKAAHAALDGLA 256
           +G+  G+   G  F      T FD         QAE  L L +D            D  A
Sbjct: 169 QGQHTGSVEFGMSF----GQTFFDHFKNAY---QAEISLLLPKDGGFVPFGGTFTTDTSA 221

Query: 257 KSSNASLKQGSELFEEQVVMAETLDAPWQDFY---DGVSRLMAQTYQLDDATLTFLGQQL 313
            S   S+ QG E+         T+D   + F     G+     +T+ + D  L       
Sbjct: 222 ASELESVMQGDEVIR-------TIDLNGKSFALYRHGIKDYSGKTFGVLDIALD--RSHS 272

Query: 314 EQRLAQNRTHMVVLVSALSAVFLLIFYLYAGFYAS--TRTTLRRLGAMMDKVAA-GDMTV 370
           EQ ++  R  ++++      + LLI    A F A   TR       A+ D     GD+T 
Sbjct: 273 EQAMSDIRLKLIMI----GVIALLIGTAIAWFIAKSITRPIAETTDALNDIAEGEGDLTR 328

Query: 371 TFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQR 430
               +S+DE+  L Q FN    KIH  + +V  + S +   A ++  ++ ++ Q  + Q 
Sbjct: 329 RIEVKSKDEMAQLAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANRQH 388

Query: 431 MQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEID 490
           ++ EQVATAMN+M++T QEVA +A  A  +A   ++ T  G+ LV+    +I+ LA EI 
Sbjct: 389 LETEQVATAMNEMAATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLADEIA 448

Query: 491 QSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRT 550
           Q+   IN+L  ++  I SVL VI++IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVRT
Sbjct: 449 QAANAINELERNTTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRT 508

Query: 551 LARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVGM 610
           LA RTQ ST EI+QMI  LQ    A V +M +S       V        ALE I  AV  
Sbjct: 509 LASRTQASTTEIQQMIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAVST 568

Query: 611 IVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQL 670
           I   N QIA+A  +Q AV+ +I++N+  IN    +A E A QT  A  +L+   + L  L
Sbjct: 569 ISQMNIQIASAANEQCAVSAEINKNVNNINDIATNATESAMQTARAGDELAQLSMRLTTL 628

Query: 671 IGAFRV 676
           +  F++
Sbjct: 629 LSQFKI 634