Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  238 bits (608), Expect = 5e-67
 Identities = 203/685 (29%), Positives = 335/685 (48%), Gaps = 53/685 (7%)

Query: 21  FSLVSVLFLLPMLATNYYLVRDSWREYQGTRVELQSLDLLGSSLALRRDLETLNNQVQIN 80
           FS+V++L +L  L    YL   S ++      EL SL  L ++  L   L     QV I 
Sbjct: 13  FSVVTLLLVL--LGFTSYLTNISLKDSSAMMQEL-SLPALKATNHLTETLSEQQRQVLIA 69

Query: 81  ATLGQSGKAGDLEGKISALEQSVLSRLQSLNAMATEPEQIAAFDAKRDELIAAFKAQ--- 137
               +S    D+    +       + + +L  +      ++A  ++ D   + F+     
Sbjct: 70  YHAPKSSNIPDIRKVFNDHGTQFKNEISNLTQLVQGQANLSALISQLDGSFSTFERDSLA 129

Query: 138 ---QQETSLLSKSALIG---KLLNKAQ----MLSQIIASQAGLSRDSQSDLRQLSELITS 187
              ++E +L  +  LIG   KL N A     +L  II  +   + D+QS     S + TS
Sbjct: 130 MLTEREAALSKQEQLIGLKKKLENAADDASSVLLDIIDLENSQNPDAQSIAASASAIDTS 189

Query: 188 VTPLVTQTLGEGRAMGAYSLGQGFLNSSSSTRFDELLQQLEKIQAEYGLKLQDALGSSKA 247
           +  ++T T+ +             + +   ++ + + ++L+ I +E   KL+     ++ 
Sbjct: 190 MGNIIT-TIAD------------LVTNEEMSKHELISKELDYILSETKNKLEYV---NRH 233

Query: 248 AHAALDG-LAKSSNASLKQGSELFE--EQVVMAETLD-----------APWQDFYDGVSR 293
           A   +D    KS N   K+   L E  + +V+ +              A  +     + R
Sbjct: 234 AQDIIDADTLKSVNEDTKKVLALLEGPDSMVLLKATQLNHAKSAMNQLATIEKDVKVIDR 293

Query: 294 LMAQTYQLDDATLTFLGQQLEQRL--AQNRTHMVVLVSALSAVFLLIFYLYAGFYASTRT 351
            M       ++    + Q+   ++  A  RT +VVL++ ++AV +    +     A  + 
Sbjct: 294 NMEDVSNNIESVAANMSQETIAKIDAASIRTIIVVLIAIVAAVIISFAVV-----APLKR 348

Query: 352 TLRRLGAMMDKVAAGDMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQ 411
           +L ++   ++ +A+G++T        DE  +L +  N  V  +  LI  +    +Q+   
Sbjct: 349 SLYQVNNALNVLASGNLTHKLDDSGHDEFAELAKNCNRLVDSLRGLIVGILDRSNQLAAA 408

Query: 412 AGQVETVSAQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSG 471
           A Q   ++AQ+   +  Q+ Q++QVATA  ++SS+AQ+V+ SA  A++     + E    
Sbjct: 409 AEQTSAITAQTTSGIQEQKSQVDQVATATTELSSSAQQVSMSADDALAQIKQADQEAKHM 468

Query: 472 RSLVQSQQGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEA 531
           R++ +  + +I  LA E+ ++ QVIN++ +DS SI S+L+VI+ IAEQTNLLALNAAIEA
Sbjct: 469 RTIAEENKRTILALADEVAKAGQVINKVQSDSASIGSILDVIRGIAEQTNLLALNAAIEA 528

Query: 532 ARAGEQGRGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTV 591
           ARAGEQGRGFAVVADEVR+LA RTQ ST EI+QMI  LQ G   AV AM      A+  V
Sbjct: 529 ARAGEQGRGFAVVADEVRSLASRTQVSTREIQQMIEVLQQGAQQAVAAMDMGRAQANACV 588

Query: 592 GQSERVQQALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAY 651
            ++E+   ALE I  +V    D    IA A ++Q  V+  + + +  I    E  A GA 
Sbjct: 589 DKTEQANLALETISQSVHKAYDAGTHIAHAAQEQNVVSQQVSEKLEHIAAISEETAIGAD 648

Query: 652 QTEAASRQLSLQVIELKQLIGAFRV 676
           QT  +S Q++    EL+  +G FRV
Sbjct: 649 QTAQSSHQVAKLAEELQASVGEFRV 673