Pairwise Alignments

Query, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 630 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  224 bits (570), Expect = 1e-62
 Identities = 136/367 (37%), Positives = 206/367 (56%), Gaps = 4/367 (1%)

Query: 314 EQRLAQNRTHMVVLVSALSAVFLLIFYLY-AGFYASTRTTLRRLGAMMDKVAAGDMTVTF 372
           +  +    T +   +SA+ A  L+IF L     +      L R+   ++ +A GD  +T 
Sbjct: 264 KDEIMSQATTLAWWMSAVGAGLLVIFGLVLVAIFKIQFKDLERVALALNDIAEGDGDLTV 323

Query: 373 ---VAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETVSAQSNQAVSGQ 429
               A S DE+G L   FN  V ++H +I R+     Q+E QA      +  ++Q ++ Q
Sbjct: 324 RIHTANSHDEIGILASGFNRFVERLHGMISRMHKIAGQLEYQAQGSSASATDNSQRIAVQ 383

Query: 430 RMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQQGSIARLATEI 489
           + ++  VATA+ +M+S  +E+A +A     +A      +  G+  V   Q SI  LA E+
Sbjct: 384 QDEVTMVATAVTEMASATEEIASNAEHTAQTAQDAVGLSNHGQKQVMQSQQSIRNLANEV 443

Query: 490 DQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 549
           + + ++I++L   SQ I+S+L  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR
Sbjct: 444 ETAGRIISELNEHSQKINSILLTISGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 503

Query: 550 TLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQQALENILGAVG 609
            L++RT  ST+EI+ MI  LQ     AVK+M  SHDMA  +V  +    ++L  I  A+ 
Sbjct: 504 VLSQRTHSSTQEIQAMIETLQQTAGKAVKSMTQSHDMAETSVADANSASESLLQISKAIN 563

Query: 610 MIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASRQLSLQVIELKQ 669
            I D   QIA A E+QT+V  +I++N   I    E+ +  A  +   +++L+     L+Q
Sbjct: 564 EISDMASQIATAAEEQTSVTSEINRNTESIREVSENLSIEAQSSMVQAQELAHLAASLQQ 623

Query: 670 LIGAFRV 676
            +G F++
Sbjct: 624 EVGRFKL 630