Pairwise Alignments

Query, 187 a.a., N-acetyl-anhydromuranmyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 241 a.a., AmpD (negative regulator of AmpC) (NCBI) from Rhodospirillum rubrum S1H

 Score =  103 bits (256), Expect = 3e-27
 Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 23/166 (13%)

Query: 18  SPNYNERPAGEI-SLLVVHNISLPPAQFATGKVQEFFQNRLDVTEHPYFEGIADLRVSAH 76
           SPN ++RP G+I  +LV+H   +P AQ A  ++ +                    +VSAH
Sbjct: 17  SPNADDRPPGQIIDMLVIHYTGMPSAQAALARLLD-----------------PQAQVSAH 59

Query: 77  FLIERDGAVTQFVSCLDRAWHAGISQFEGRDTCNDFSLGVELEGTDDQ----PFTDAQYA 132
           +LI+ DG   + V    RAWHAG+S + GR   N  S+G+EL     +    PF +AQ  
Sbjct: 60  WLIDEDGTAYKLVEERRRAWHAGVSAWGGRPGVNARSIGIELVNPGHEFGYRPFPEAQMT 119

Query: 133 SLTNLTRQLLAAYPDITPQRICGHSDIAPGRKTDPGPAFDWTRFRS 178
           +L  L R +L  +P I    + GH+D+AP RK DPG  FDW R  S
Sbjct: 120 TLIALGRGILERHP-IPAAHVVGHADVAPTRKEDPGELFDWQRLAS 164