Pairwise Alignments

Query, 306 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 310 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 17/243 (6%)

Query: 21  AQAEVKVLTSIKPLQLIAAAVQDGVAVPEVLLPPGASPHNYALRPSDVRRVQSVDLLYWI 80
           A   +KV+T+   +  +A  V    A    +  PGA  H Y   P D+ R +  DL+ W 
Sbjct: 37  AARRLKVVTTFTIIADMARNVAGEAADVVSITKPGAEIHTYQPTPGDLMRARGADLVLWN 96

Query: 81  GPDMESFLPRVLKGRTATTVAVQDLPGMKLRRFAEDNHSHADDADEHDHDHRPGSLDAHL 140
           G ++E +  +  +        + D+PG+ + +             E  ++ +P   + H 
Sbjct: 97  GLNLELWFEQFFEN-------LGDVPGVVVSQKVV-----PIGIGEGPYEGKP---NPHA 141

Query: 141 WLSTVNARVIAARMAADLAAADPANAARYQSNAKAFDERLDALDARLKARLAPI-DGKPY 199
           W+S   A +    +A  LA  DP NAA Y+ NA ++  R++   A L+  LA + + + +
Sbjct: 142 WMSPTAALLYVDTIAEALATHDPQNAALYRDNAASYKRRIEETVAPLRIALAALPEERRW 201

Query: 200 FVFHE-AFDYFEEAYGLKHAGVFSVAAEVQPGAQHVAAMRTRLQEVGKTCVFSEPPLRPR 258
            V  E AF Y    + L+   ++ + A+ Q   Q V  +   ++      +FSE  +   
Sbjct: 202 LVTSEGAFSYLARDFSLRELYLWPINADQQGRPQQVRKVVDAMRAQAIPAIFSESTISSA 261

Query: 259 LAE 261
            AE
Sbjct: 262 PAE 264