Pairwise Alignments

Query, 138 a.a., fimbrial protein from Pseudomonas simiae WCS417

Subject, 153 a.a., prepilin-type cleavage/methylation domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score = 84.3 bits (207), Expect = 7e-22
 Identities = 54/143 (37%), Positives = 72/143 (50%), Gaps = 10/143 (6%)

Query: 2   RRQKGFTLIELLIVVAIIGILATIGLPMYTTHQAKAKFTAGLAEITALKPGYEDTL---- 57
           ++QKGFTLIEL+IVVA+IG+LA I +P Y  +  K+    GLA ITALK   ED +    
Sbjct: 7   KQQKGFTLIELMIVVAVIGVLAAIAIPQYQNYVKKSAIGVGLANITALKTNIEDYIATEG 66

Query: 58  -----NQGTVPTLALIGGTSPTANCKIDVTGDVATGAGSISCEILDAPAPVLGKTISLTR 112
                  GT      +G      + KI V    A+GA   + +       V    I L R
Sbjct: 67  SFPATTAGTAAGFTRLGTVEDMGDGKI-VIAPTASGALGGTIKYTFDAGVVSSSKIQLAR 125

Query: 113 NAATGWTCTTTADAKYVAKGCGA 135
           +A   WTC+TT  ++   KGC A
Sbjct: 126 DANGLWTCSTTVTSEIAPKGCTA 148