Pairwise Alignments

Query, 229 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 220 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  110 bits (275), Expect = 2e-29
 Identities = 61/187 (32%), Positives = 97/187 (51%)

Query: 32  WVELFADRRRQHLLFGTVFALFMLWLVRRDFDTGVSYHFIGMTAVTLLLDWPLAIVGGFA 91
           W +   D+  QHL +  +  LF+LW  +     G+S HF+ +T +T++  W  A +    
Sbjct: 28  WPKFRDDKSFQHLTYFVMLGLFLLWSAQASVKEGLSIHFLALTTLTMMYGWRSAFILTLP 87

Query: 92  AQLGLMALGRQDLAALGVNGLLLIGLPVLVTEACALLVERAQPRNPFVYIFCSGFFAAAL 151
               L   G+   AAL    LL   LP+L++ +   L     PRN FV+IF +GFF A +
Sbjct: 88  VSATLALFGKISFAALPEYLLLSSLLPILISYSIFALSYHYLPRNIFVFIFVAGFFNAGV 147

Query: 152 SALLCLVLGLGLLWFDGRFALPEWLEDFVGYLWLIIFPEAFINGMVVSALVVFCPEWLET 211
           +  L L+L    +W  G +      ++++ ++ L+ FPE  +NGM ++ L VF PEWL  
Sbjct: 148 TGSLHLLLNSLYIWQLGAYDWITITDNYLIFVPLLAFPEGLLNGMALAILAVFRPEWLRV 207

Query: 212 FNRTRYL 218
           F+   YL
Sbjct: 208 FSDRDYL 214



 Score = 23.1 bits (48), Expect = 0.005
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 15  GWLLYVPLVVWAILRSPWVELFADR 39
           G L  + L + A+ R  W+ +F+DR
Sbjct: 187 GLLNGMALAILAVFRPEWLRVFSDR 211