Pairwise Alignments

Query, 229 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 226 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 83.6 bits (205), Expect = 3e-21
 Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 14/215 (6%)

Query: 12  LGAGWLLYVPLV---VWAILRSPWVE-LFADRRRQHLLFGTVFALFMLWLVRRDFDTGVS 67
           LG   LL + ++   +WAI     V+ L  D+  Q  L   +F +  LWL+      G+ 
Sbjct: 16  LGGAQLLTMAVLALWLWAIWPVEDVKALLKDKALQTRLLLAIFFVNALWLIDASITPGIH 75

Query: 68  YHFIGMTAVTLLLDWPLAIVGGFAAQLGLMALGRQDLAALGVNGLLLIGLPVLVTEACAL 127
            HF+G+  + L+  W LA +              +      + GL+ I LP+ ++     
Sbjct: 76  AHFLGLVTLMLMFGWRLATLALLLPVAFFATFMLKLPLDFAIYGLVAIALPLFLSYVVYS 135

Query: 128 LVERAQPRNPFVYIFCSGFFAAALSALLCLVLGLGLLWFDGRFALPEW-----LEDFVGY 182
            V +  P + FVYIFC  F    ++A LC+V  + L W    +   ++      ++++  
Sbjct: 136 QVFKYLPHHLFVYIFCGAF----MNAFLCIVFHI-LSWSTWLYLTTDYDWAYLTDNYLLL 190

Query: 183 LWLIIFPEAFINGMVVSALVVFCPEWLETFNRTRY 217
           + L+ FPEA +NGM ++ +VV+ PEWL  ++   Y
Sbjct: 191 IPLLAFPEALLNGMAMTLMVVYRPEWLYDYSDRTY 225