Pairwise Alignments

Query, 432 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

Subject, 433 a.a., NADH dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score =  398 bits (1022), Expect = e-115
 Identities = 205/431 (47%), Positives = 289/431 (67%), Gaps = 7/431 (1%)

Query: 5   IIIVGGGAGGLELATRLGKTLGKRGTASITLVDTNLTHIWKPLLHEVAAGSLNSSEDELN 64
           I+IVGGGAGG+E+AT+LG+ LG++G A ITL+D   +HIWKPLLHEVA G+L+   D ++
Sbjct: 7   IVIVGGGAGGMEIATKLGRKLGRKGKAKITLIDCADSHIWKPLLHEVATGALDIGIDAIS 66

Query: 65  YVAQAKWNHFEFQLGRMSGLDREQKKIQLAATLDEEGRELVPARVLGYDSLVIAVGSTTN 124
           Y   A  + + FQ G M+ +DRE K++ LA  LDE+G EL+PAR + YD LV+A+GS  N
Sbjct: 67  YRGHAAAHGYHFQQGAMTDIDREHKQVILAPILDEKGNELLPARRIDYDYLVLAIGSIAN 126

Query: 125 DFGTEGAAQHCLFLDTRKQAERFHQQLLNHYLRAHAGQTDVVEKISVAIVGAGATGVELA 184
           DF   G  +HC+FLD  +QA +    LLN ++R +A    + +KI +A+VGAGATGVE++
Sbjct: 127 DFKIPGVREHCVFLDNTQQAMQIRTMLLNKFMR-YASHHQLDDKIKIAVVGAGATGVEMS 185

Query: 185 AELHNAAHELAAYGLDRIKPENMHITLIEAGPRVLPAL-PERIGAPVHKTLEKLGVTVLT 243
           AE+H+A  +L+ +G  +I    + +TLIEA  R+LP +  + I   V   L ++GV V+T
Sbjct: 186 AEMHHAVEQLSGFGY-KIDTSLLEVTLIEADSRILPKVEKQEISQAVTNQLNQIGVRVMT 244

Query: 244 NSAVSEVTADALITSSGQVIPASLKVWAAGIRAPGFLKDIDGLETNRINQLQVLPTLQTT 303
           N+ +  V   AL T  GQ I + + +W+ G++AP F+++I GLE+N+INQ+ V P +QTT
Sbjct: 245 NTRIDRVDESALHTCDGQTIASDMTIWSTGVKAPDFMREIGGLESNQINQVMVKPNMQTT 304

Query: 304 RDENIFAFGDCAACPQPGTDRNVPPRAQAAHQQASLLAKSLKLRIEGKDLPS--YKYTDY 361
           RD +IFA GDCAACPQP     VPPR Q+A Q A + A ++ L + G+  PS  Y Y D 
Sbjct: 305 RDPHIFAIGDCAACPQPDGSW-VPPRGQSARQMALMTADNISLMLAGQP-PSKEYLYKDL 362

Query: 362 GSLISLSRFSAVGNLMGNLTGSVMLEGWLARMFYVSLYRMHQMALYGFFRTAMLMLGSKI 421
           GSL++LS+F  VGNLM  + G V++EG +AR  Y SLYR H + L+G F+  +LM    I
Sbjct: 363 GSLVNLSKFHTVGNLMSFIGGGVLVEGKIARFVYTSLYRRHLIELHGIFKGTLLMFAKGI 422

Query: 422 GRGTEPRLKLH 432
            R   P LKLH
Sbjct: 423 SRIIHPHLKLH 433