Pairwise Alignments

Query, 854 a.a., protein disaggregation chaperone from Pseudomonas simiae WCS417

Subject, 879 a.a., ATP-dependent chaperone ClpB from Rhodopseudomonas palustris CGA009

 Score =  941 bits (2433), Expect = 0.0
 Identities = 484/861 (56%), Positives = 640/861 (74%), Gaps = 11/861 (1%)

Query: 1   MRIDRLTSKLQLALSDSQSLAVGLDHPAIEPAHLMQALLEQQGGSIKPLLMQVGFDVNSL 60
           M +++ T +++  +  +QSLA+   H    P H+++ LL+   G    L+ + G +  ++
Sbjct: 1   MNVEKYTERVRGFIQSAQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAI 60

Query: 61  RKELSKELDQLPKIQNP-TGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLA-AMDE 118
            K   + L ++PK+     G V ++   AR  + A++ A++ GD F++ E +LLA ++D+
Sbjct: 61  LKATEEALGKMPKVSGSGAGQVYLAPATARAFDAAEKAAEKAGDSFVTVERLLLALSLDK 120

Query: 119 NSKLGKLLLGQGVSKKALENAINNLRGGDAVNDPNHEESRQALDKYTVDLTKRAEEGKLD 178
           +S+ G+LL   GV+ + L  AIN LR G   +    E +  AL KY  DLT+ A +GKLD
Sbjct: 121 DSEAGQLLTKGGVTPQNLNAAINALRKGRTADSATAENAYDALKKYARDLTQAARDGKLD 180

Query: 179 PVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLL 238
           PVIGRD+EIRRTIQVL RRTKNNPVLIGEPGVGKTAI EGLA RI+NG+VP+ LK K+LL
Sbjct: 181 PVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLL 240

Query: 239 SLDMGSLIAGAKFRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNM 298
           +LDMG+LIAGAK+RGEFEERLK++LNE++  EG IILFIDE+HT+VGAGK +G+MDA N+
Sbjct: 241 ALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMDASNL 300

Query: 299 LKPALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYE 358
           LKPALARGELHC+GATTL+EYR+++EKDAAL RRFQ V V EP+ EDT++ILRGLK++YE
Sbjct: 301 LKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKDKYE 360

Query: 359 VHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRR 418
            HH V I D A++AA  LS+RYITDR LPDKAIDL+DEAA+R++M++DSKPE LD +DR 
Sbjct: 361 QHHGVRIADSALVAAVTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDRE 420

Query: 419 LIQLKVESQALKKEEDDAAKKRLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQK 478
           +++LK+E +ALKKE D  +K RL  L++E+  LE + + L + W++EK ++  + +++ +
Sbjct: 421 IVRLKIEQEALKKETDPGSKARLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQKLKSE 480

Query: 479 IEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKPENQLLRSKVTEEEIAE 538
           ++  R EL  A+R+G+  R  EL YG IP+LE+ +  ++ + +    ++   VT   IA+
Sbjct: 481 LDALRIELANAQRRGEYQRAGELAYGRIPELEKKIAEIEAN-ENSGAMVEEAVTANHIAQ 539

Query: 539 VVSKWTGIPVSKMLEGERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPS 598
           VVS+WTG+PV KMLEGE++KLL+ME  L QRV+GQ EAV AVS AVRR+RAGL DPNRP 
Sbjct: 540 VVSRWTGVPVDKMLEGEKEKLLRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDPNRPM 599

Query: 599 GSFMFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEE 658
           GSFMFLGPTGVGKTEL KALAE+LFD E AMVRIDMSEFMEKHSVARLIGAPPGYVGY+E
Sbjct: 600 GSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGYDE 659

Query: 659 GGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTS 718
           GG LTEAVRR+PY VIL DE+EKAHPDVFN+LLQVL+DGRLTD  GRTVDFRNT+IVMTS
Sbjct: 660 GGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTS 719

Query: 719 NLGSAQIQELVGDREGQ-----RAAVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGIT 773
           NLGS   + LV   EG+     R  VM  + +HFRPEF+NRVDE+++F  L + ++  I 
Sbjct: 720 NLGS---EYLVNQPEGEDTGAVREQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGRIV 776

Query: 774 EIQLGRLRGRLAERELDLVLSSEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILS 833
           +IQ  RL   L +R++ L L + A D L   G+DP YGARPLKR IQR +++PLA++IL 
Sbjct: 777 DIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILE 836

Query: 834 GSFMPGTSVEATVENDEIVFH 854
           GS   G  V  + E   + F+
Sbjct: 837 GSVKDGDHVAISAEGGVLTFN 857