Pairwise Alignments

Query, 854 a.a., protein disaggregation chaperone from Pseudomonas simiae WCS417

Subject, 848 a.a., Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1) from Mycobacterium tuberculosis H37Rv

 Score =  909 bits (2348), Expect = 0.0
 Identities = 475/845 (56%), Positives = 621/845 (73%), Gaps = 12/845 (1%)

Query: 7   TSKLQLALSDSQSLAVGLDHPAIEPAHLMQALLEQQGGSIKPLLMQVGFDVNSLRKELSK 66
           T+K Q AL+ +   A    +P I PAHL+ ALL Q  G   PLL  VG +  ++R E  +
Sbjct: 7   TTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAETQR 66

Query: 67  ELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENSKLGKLL 126
            LD+LP+    +    +S++    +  A +LA +  D+++S+E V++     +S + KLL
Sbjct: 67  LLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSDVAKLL 126

Query: 127 LGQGVSKKALENAINNLRGGDAVNDPNHEESRQALDKYTVDLTKRAEEGKLDPVIGRDDE 186
            G G S +AL  A   +RG   V  P  E + QAL KY+ DLT RA EGKLDPVIGRD+E
Sbjct: 127 TGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPVIGRDNE 186

Query: 187 IRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLI 246
           IRR +QVL RRTKNNPVLIGEPGVGKTAI EGLAQRI+ G+VP+ L+ K +++LD+GS++
Sbjct: 187 IRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMV 246

Query: 247 AGAKFRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGK-GEGSMDAGNMLKPALAR 305
           AG+K+RGEFEERLK++L+++    GQII FIDELHT+VGAG  GEG+MDAGNM+KP LAR
Sbjct: 247 AGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLAR 306

Query: 306 GELHCVGATTLNEYRQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAI 365
           GEL  VGATTL+EYR++IEKDAALERRFQ+V V EPS EDTI ILRGLK+RYEVHH V I
Sbjct: 307 GELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRI 366

Query: 366 TDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVE 425
           TD A++AAA LS RYIT R LPDKAIDL+DEAASR+RMEIDS+P  +D ++R + +L++E
Sbjct: 367 TDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRLEIE 426

Query: 426 SQALKKEEDDAAKKRLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQE 485
             AL KEED+A+ +RL KL+ E+   + + ++L   W +EK  ++    +++++E  R E
Sbjct: 427 EMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLEALRGE 486

Query: 486 LEAARRKGDLNRMAELQYGVIPDLERSLQM-VDQHGKPENQLLRSKVTEEEIAEVVSKWT 544
            E A R GDL + AEL+YG IP++E+ L   + Q    E  +L+ +V  ++IA+VVS WT
Sbjct: 487 SERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIADVVSAWT 546

Query: 545 GIPVSKMLEGERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFL 604
           GIP  ++LEGE  KLL+ME  L +RVIGQ+ AV AVS+AVRRSRAG+SDPNRP+G+FMFL
Sbjct: 547 GIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFL 606

Query: 605 GPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTE 664
           GPTGVGKTEL KALA+FLFD E AMVRIDMSE+ EKH+VARLIGAPPGYVGYE GG LTE
Sbjct: 607 GPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTE 666

Query: 665 AVRRKPYSVILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQ 724
           AVRR+PY+V+L DE+EKAHPDVF++LLQVL++GRLTD HGRTVDFRNT++++TSNLGS  
Sbjct: 667 AVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGSG- 725

Query: 725 IQELVGDREGQRAAVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRL 784
                    G    V+ A+ + F+PEFINR+D+V+IFE L  +++  I +IQL +L  RL
Sbjct: 726 ---------GSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRL 776

Query: 785 AERELDLVLSSEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILSGSFMPGTSVEA 844
           A+R L L +S  A   L   G+DPVYGARPL+R +Q+ I + LA+++L+G    G +V  
Sbjct: 777 AQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPV 836

Query: 845 TVEND 849
            V  D
Sbjct: 837 NVSPD 841