Pairwise Alignments

Query, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

Subject, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

 Score =  118 bits (296), Expect = 1e-31
 Identities = 83/226 (36%), Positives = 119/226 (52%), Gaps = 22/226 (9%)

Query: 80  DIELDIVYEDDDILVINKPAGLVVHPAAGHADGTLLNALLHHVPDIINVPRCGIVHRLDK 139
           D  LD++YED  ++V+NKPAGL+  P  G      L + +  V          I HRLD 
Sbjct: 9   DTGLDLLYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQAV-----FADAMIAHRLDM 63

Query: 140 DTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIGVVV-AGGKINAPIGRHGQQRQRM 198
           DT+GL+V+A+    Q +L    + R VS+ Y+ +V GV+    G+++ P+      R R 
Sbjct: 64  DTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEGEVDLPLIVDWPNRPRQ 123

Query: 199 AV-MEGGKQAVSHYRVLERFRSHTHVRVKLE--TGRTHQIRVHMAHINFPLVGDPAYGGR 255
            V  + GK +++ +R L    +    RV+LE  TGRTHQ+RVHMA I  P++GD  Y G 
Sbjct: 124 KVDFQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMAAIGHPILGDELYAG- 182

Query: 256 FRIPPAASATMVDSLKNFPRQALHARFLELDHPTSGKRMSWESPLP 301
              P  A A          R  LHA  LE  HP + + +S+ESP P
Sbjct: 183 ---PAQARA---------ERLLLHASRLEFRHPITDEALSFESPPP 216