Pairwise Alignments

Query, 341 a.a., DNA transporter from Pseudomonas simiae WCS417

Subject, 268 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  189 bits (480), Expect = 7e-53
 Identities = 101/248 (40%), Positives = 148/248 (59%), Gaps = 2/248 (0%)

Query: 4   KHLLLIAILAMTAACSSTKEVVD--ENLSEVELYQLAQKDLDNNSFTSATAKLKALESRY 61
           K L L+      +ACSS+ E  D     S  ELY  A+  ++  +++ A   L+AL+SR+
Sbjct: 21  KGLTLVLFSLALSACSSSPEDNDIAAKTSPDELYSQARTSMELGNYSKAVRSLEALDSRF 80

Query: 62  PFGRYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVG 121
           PFG +  Q QL+LIYA YK  +  +  +  +RFIRL+P HPN+DY YYM+GL +   D  
Sbjct: 81  PFGPHKTQVQLDLIYAYYKMDDVASGIANIDRFIRLNPTHPNIDYVYYMRGLVNMQADSY 140

Query: 122 LLARFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIHVA 181
           L    L +D T RDP  A+D++ +F +L   YPNS+YA DA++RM+ L+N LA Y I VA
Sbjct: 141 LFHDMLNIDRTDRDPKNAQDAFKDFDRLIKTYPNSKYAADAQKRMLSLKNRLAKYSIQVA 200

Query: 182 HYYLTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKLNY 241
            YY+   A+ AAA R + V+E +  TPS    L +M EAY  L  ++L    L  ++ N+
Sbjct: 201 EYYIKMNAWSAAAVRAQSVLETYPGTPSTERALEIMAEAYGELGQNQLKQNVLMVMQANF 260

Query: 242 PDHPSLKD 249
           P++  L +
Sbjct: 261 PNNEILSN 268