Pairwise Alignments

Query, 341 a.a., DNA transporter from Pseudomonas simiae WCS417

Subject, 309 a.a., beta-barrel assembly machine (BAM) protein BamD from Caulobacter crescentus NA1000

 Score =  101 bits (252), Expect = 2e-26
 Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 24/296 (8%)

Query: 9   IAILAMTAACSSTKE----VVDENLSEVELYQLAQKDLDNNSFTSATAKLKALESRYPFG 64
           + + A  A C+   +    V +E   E+ LY      LD  ++  A    + +E ++P+ 
Sbjct: 20  VLVAASVAGCAGKAKKPTLVYEERPVEL-LYSTGADRLDRGNWNEAVDYFREVERQHPYS 78

Query: 65  RYADQAQLELIYANYKNAEPEAAKSAAERFIRLHPQHPNVDYAYYMKGLTSFDQDVGLLA 124
            ++ ++ L   YA+Y   +   A   A+RFI L+P +P+  YA+Y+K +  F+Q V +  
Sbjct: 79  EWSRRSILMTGYAHYMGNQYAEAIGDADRFISLYPGNPSAQYAFYLKAICYFEQIVDV-- 136

Query: 125 RFLPLDMTKRDPGAARDSYNEFAQLTSRYPNSRYAPDAKQRMIYLRNLLASYEIHVAHYY 184
                    RD  A   +      +  RYPN+ YA DA+ ++  + + LA  E+ +  +Y
Sbjct: 137 --------NRDQAATEQALAALRDVVQRYPNTEYATDARLKIDMVNDQLAGKEMAIGRWY 188

Query: 185 LTRQAYVAAANRGRYVVENFQETPSVGDGLAVMTEAYQRLHLDELASTSLETLKLNYPD- 243
           L     +AA  R + V+E  Q T    + L  + EAY  + L+E A  +   L  N+P  
Sbjct: 189 LKNGQTLAAIGRFKAVIERHQTTSHTPEALFRLVEAYLTIGLNEEAKRNGAVLGYNFPGD 248

Query: 244 ------HPSLKDGQFVPQV--AEADNRSWLSKYTLGLIESRPPLPPGETRANQDVI 291
                 +  L D    P V   +A  +    +  L   +     PPGE +A + ++
Sbjct: 249 RWYVDAYRLLNDNGLRPAVEPLKAGAKRNALERILSKDKEATLAPPGERKAKKGLL 304