Pairwise Alignments

Query, 262 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 260 a.a., zinc ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  295 bits (755), Expect = 6e-85
 Identities = 153/254 (60%), Positives = 203/254 (79%)

Query: 1   MADFLLYALLAGLALALVAGPLGSFVVWRRMAYFGDTLSHAALLGVAMGFLLDVSPTIAV 60
           M + LL +LLAGL +A++AGPLGSFVVWRRMAYFGDTL+HA+LLG+A+GFLLD++  +A+
Sbjct: 1   MIELLLPSLLAGLGIAIIAGPLGSFVVWRRMAYFGDTLAHASLLGLALGFLLDINLYLAL 60

Query: 61  TVGCLLLAVLLVTLQQRQPLASDTLLGILAPSTLSLGLVVLSFMHEVRIDLMAYLFGDLL 120
            V CL +A +LV +Q+++ +A+DTLLGI+A S LSLG++ +SF+  VRIDLM+YLFGDLL
Sbjct: 61  LVCCLGMAAILVAMQKQKLIATDTLLGIMAHSALSLGMIAVSFLDNVRIDLMSYLFGDLL 120

Query: 121 AISTTDLAWILGGSAAVLVLLVALWRPLLAITVHEELATVEGLPVPSLRMALMLLIAVVI 180
           AIS +DL +I  G   V +++  LW+PLL+ +V+EELA VEG     +R+ LMLLI +VI
Sbjct: 121 AISPSDLTFIWFGVVTVSLIVYLLWQPLLSTSVNEELAFVEGTNTDLMRLILMLLIGLVI 180

Query: 181 AVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMAIGASLLGMLAVCGGLALSWFKDTPAG 240
           AV MK VG L++ SLLIIPAA A+R +R+PE MA  A  LG+L+V GGLALSW  DTPAG
Sbjct: 181 AVGMKFVGALIMGSLLIIPAATARRLSRTPEAMAFWAIGLGVLSVIGGLALSWHFDTPAG 240

Query: 241 PSIVVTAAALFLLS 254
           PS+VV+AA LF+L+
Sbjct: 241 PSVVVSAAVLFVLT 254