Pairwise Alignments

Query, 262 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 285 a.a., ABC-3 transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  109 bits (273), Expect = 6e-29
 Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 7/260 (2%)

Query: 4   FLLYALLAGLALALVAGPLGSFVVWRRMAYFGDTLSHAALLGVAMGFLLDVSPTIAVTVG 63
           FL  A++  L +A+    L  F+V +  A  GD +SHA L GV + ++  +   +     
Sbjct: 17  FLRDAMIIALLVAVPTALLSCFLVLKGWALMGDAISHAVLPGVVLAYVAGLPLGVGAFAA 76

Query: 64  CLLLAVLLVTLQQRQPLASDTLLGILAPSTLSLGLVV-LSFMHEVRIDLMAYLFGDLLAI 122
            L  A++   L+    +  DT++G++      LG+V+  S   +V +D +  LFGD+L +
Sbjct: 77  GLGCALVTGYLKDNSRIKQDTVMGVVFSGMFGLGIVLHTSIRTDVHLDHI--LFGDMLGV 134

Query: 123 STTDLAWILGGSAAVLVL--LVALWRPLLAITVHEELATVEGLPVPSLRMALMLLIAVVI 180
            ++DL  +  G  A+LV+  +    R LL      + A   GLPV  L   L+ L+A+ I
Sbjct: 135 GSSDL--LESGLIALLVVGAIALKGRDLLLHAFDPQQARAIGLPVGLLHYGLLCLLALTI 192

Query: 181 AVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMAIGASLLGMLAVCGGLALSWFKDTPAG 240
             A+K  G+LL  +LLI P A A    R    M + A ++  LA   G+ +S F D+   
Sbjct: 193 VGALKATGILLTVALLIGPGAIAFLFTRRFSSMLLAAVVISSLASVLGVYISLFLDSAPA 252

Query: 241 PSIVVTAAALFLLSFVLPRR 260
           P+IV+     F+ +F++ R+
Sbjct: 253 PTIVLLLTLTFIAAFMVSRQ 272