Pairwise Alignments

Query, 512 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 540 a.a., integral membrane protein MviN from Synechococcus elongatus PCC 7942

 Score =  147 bits (372), Expect = 7e-40
 Identities = 133/509 (26%), Positives = 229/509 (44%), Gaps = 26/509 (5%)

Query: 5   KSLAAVSSI----TMISRVLGFVRDTLLARIFGASMATDAFFIAFKLPNLLRRIFA--EG 58
           +SLA ++ I    T++S+V G VR   +A  FG   A DA+  A+ +P  L  +     G
Sbjct: 9   RSLAGIAGIVAVATLLSKVFGLVRQQAIAAAFGVGPAFDAYNYAYVIPGFLLILLGGING 68

Query: 59  AFSQAFVPILAEYKTQQGEEATRTFIAYVSGLLTLVLMLVTLLGMLAAPWVIWATAPGFA 118
            F  A V +LA+   Q       T    ++ L+ + L++VT++ ++ A  +I   APG  
Sbjct: 69  PFHSAMVSVLAKRDRQDSGPLVET----ITTLVGISLLIVTVVIVVFADPLIGLVAPGLE 124

Query: 119 NTP---EKFALTTDLLRVTFPYILLISLSSLAGAILNTWNRFSVPAFVPTLLNVSMIIFA 175
            TP   E  A+    LR+  P  LL  L  +   +LN  + + +P+  P   +V++I   
Sbjct: 125 LTPTGQETRAIAVLQLRIMAPMALLAGLIGIGFGVLNAADTYWLPSISPLFSSVTVIAGV 184

Query: 176 LFL-----TPYFDPPVMALGWAVLAGG-----LAQLLYQLPHLKKIGMLVLP-RLNLKDT 224
             L     +    P +  +G  VLAG      + Q L QLP   + G+  L  R   +  
Sbjct: 185 GLLWWQVGSRITSPQLAIVGGLVLAGSTLLGAILQWLIQLPSQFRHGLAGLRLRFEWQRP 244

Query: 225 GVWRVMRNMLPAILGVSVSQISLIINTAFASLLVSGSVSWMYYADRLMELPSGVLGVALG 284
            V  V+R + PA     + QI++  +  FAS +   +   + YA  L++ P G+L   + 
Sbjct: 245 EVKEVLRILGPATFSSGMLQINVYTDLFFASFIPQAAAG-LGYAGLLVQTPLGILSNVIL 303

Query: 285 TILLPTLARTYASKDRQEYSRILDWGLRLCFVLVLPCALALGILAEPLTVALFQYGQFDA 344
             LLP L+R        E  + +  GL L  +L+LP    +  LA P+   +++ G F  
Sbjct: 304 VPLLPVLSRLAEPDQWPELKQRIRQGLFLTALLMLPLGALMAALALPIVQLVYERGAFQT 363

Query: 345 HDALMTQHALIAYSVGLLGIIVIKVLAPGFYAQQNIRTPVKIAIFTLIVTQLLNLVFIGP 404
               +    L+AYS+G+   +   VL   FYA  + +TP +I++  + +  L + + IGP
Sbjct: 364 DATDLVAALLVAYSIGMFVYLGRDVLVRVFYALGDGQTPFRISMINIFLNALFDWLLIGP 423

Query: 405 LAHAGLALAISAGACINAGLLFYQLRKQQMFQPQPGWGLFALKLLV-AVGVMSAVLLGLM 463
               GL LA  +   I+   L + L ++    P   WG +   L + + G         +
Sbjct: 424 FGATGLVLATVSVNIISLIALLWILHRRLGGLPLLPWGGWITLLSIWSFGCGLLAYFTQI 483

Query: 464 HFMPAWDEGHMLERFLRLGVLVVAGVVVY 492
                W E  ++   ++L +    G++ +
Sbjct: 484 SLDRLWPESTLILLIVKLAIASGVGLLTF 512