Pairwise Alignments

Query, 335 a.a., methionine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 241 a.a., amino acid ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  192 bits (488), Expect = 7e-54
 Identities = 105/244 (43%), Positives = 150/244 (61%), Gaps = 6/244 (2%)

Query: 1   MIEFQNVHKTYRVAGKDIPALHSTSLSVENGQVFGLIGHSGAGKSTLLRLINRLEEPSGG 60
           MI   N+HK+Y     D   L   +  +  G+V  +IG SG+GKST LR IN LE P+ G
Sbjct: 1   MINITNLHKSYG----DNAVLKGINEHIRQGEVVSVIGPSGSGKSTFLRCINLLENPTQG 56

Query: 61  KITVDGEEVTALDANGLRRFRQQVGMIFQHFNLLASKTVADNVALPLTLAGELSRKEIDQ 120
            I ++G+ +TA DA  + + RQ+VGM+FQ+FNL   KTV  N+ L       +++ E D 
Sbjct: 57  DIEIEGQSITAKDAC-VDKLRQKVGMVFQNFNLFPHKTVLQNITLAPVSLKLMTQAEADN 115

Query: 121 RVAELLARVGLSDHAKKYPAQLSGGQKQRVGIARALATKPKILLCDEATSALDPQTTASV 180
           +   LL +VGL D A  YP+ LSGGQKQRV IARALA +P ++L DE TSALDP+    V
Sbjct: 116 KALALLTQVGLQDKANAYPSSLSGGQKQRVAIARALAMEPDLMLFDEPTSALDPEMVGDV 175

Query: 181 LQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDAGVIVEQGSVADVFLHPKHPTTKR 240
           L ++ ++ ++  +T+V++THEM   R V D+V  MD G +VE     ++F  PK   T+ 
Sbjct: 176 LDVMKDLAQK-GMTMVIVTHEMGFARDVSDRVIFMDGGYVVESNIPEELFTRPKEARTQS 234

Query: 241 FVQE 244
           F+ +
Sbjct: 235 FLSK 238