Pairwise Alignments

Query, 360 a.a., peptide chain release factor 1 from Pseudomonas simiae WCS417

Subject, 356 a.a., bacterial peptide chain Release factor 1 (RF-1) from Caulobacter crescentus NA1000

 Score =  390 bits (1003), Expect = e-113
 Identities = 208/354 (58%), Positives = 263/354 (74%), Gaps = 8/354 (2%)

Query: 8   KLDVLQDRFEELTALLGDGEVISDQTKFRAYSKEYADVEPVVATYKNLLKVQADLEGAQA 67
           +LD + DRF E+ A +G     +D  +    SKE+A++ PV    + L K+ A  E A+ 
Sbjct: 7   RLDQVLDRFREVEARMG---AATDGAEIVKLSKEHAELRPVAEAVERLAKLSA--ERAEL 61

Query: 68  LLKDSDPDMREMAVEEVREAKEKLAALEGDLQRMLLPKDPNDGRNVFLEIRAGTGGDEAA 127
            +  SDP+M EM  +E++   EKL  +E +L  ML PKD ++  +  LE+RAGTGGDEAA
Sbjct: 62  DVMASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAA 121

Query: 128 IFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESGAHRVQ 187
           +F+GDLFRMY RYA+ +GWRVEI S +EGE GG+KE++A + GD V+G+LKFESG HRVQ
Sbjct: 122 LFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQ 181

Query: 188 RVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKTDSAIR 247
           RVPATE+QGRIHTSA TVAVLPE ++ E IEI  +DLRIDTYRSSGAGGQHVNKTDSA+R
Sbjct: 182 RVPATEAQGRIHTSAATVAVLPEAEDVE-IEIKESDLRIDTYRSSGAGGQHVNKTDSAVR 240

Query: 248 ITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASERKLLVGSGDRSE 307
           ITHLP+G+VV    E+SQH+NRARAM  L A+L D Q  A  +A +  RK  VGSGDRSE
Sbjct: 241 ITHLPTGVVV-TSSEKSQHQNRARAMKNLKARLYDMQREALDSARSEARKSQVGSGDRSE 299

Query: 308 RIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAEYQADQLAAIGE 360
           RIRTYNF QGRVTDHR+NLTLY+L  I+ G  +D VI PL+AE QA++LA++ E
Sbjct: 300 RIRTYNFPQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQAERLASLEE 353