Pairwise Alignments

Query, 574 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 1279 a.a., cellulose biosynthesis protein BcsC from Pseudomonas fluorescens SBW25-INTG

 Score = 79.3 bits (194), Expect = 9e-19
 Identities = 130/569 (22%), Positives = 221/569 (38%), Gaps = 115/569 (20%)

Query: 38  PEKPKVYSSFSE---ETVFSLLSAELAGQRNRFDIA---------------LDNYVTQAI 79
           P+  K + +  +   +T   LL+A LA + N  D                  +NY+ QA 
Sbjct: 274 PQMTKAFKALDDGDLKTAEPLLAARLAQKSNDVDALGGMGVLRQQQERYSEAENYLVQA- 332

Query: 80  NTQDPGISERAFRIAEYLGADQAALDTSLIWAKNAPDDLEAQRAAAVQLARAGRYDDSMI 139
            T+ PG +           A Q+AL+    W      +L +Q   A +  R+ +  D + 
Sbjct: 333 -TRLPGGA-----------AWQSALNDVRYW------NLISQSRDAQRAGRSAQARDLVA 374

Query: 140 YMEKVLQGKGDTHFDFLALSAADTDQDTRDGLMKSFDRLLQKHPKNSQLIFGKALLLQQD 199
             E++  G+           A D   D  +     + ++L +HP +   + G   +L Q 
Sbjct: 375 QAERLNPGQPGAAIALAGFQAQDNQFDDAEA---GYRKVLARHPGDPDALSGLINVLSQS 431

Query: 200 DEADAALKLLEQ-NPPEEGEIAPIL----LRARLLQNL--NRG--KEAIPLLEKSIKKYP 250
            + D ALKL++  +P +  + AP +    LRA  +  L   RG  K A     +++   P
Sbjct: 432 GQPDEALKLIDSVSPAQRAKFAPSVKINALRATQVGKLAEQRGDLKAAQAAYRQALDADP 491

Query: 251 EDKRLRLTYARMLVEQDRMEDAKVQFASLVQQYPDDDELRYSLALVCLEAKAWDEAKGYL 310
           E+   R   ARM +   ++ +A+     L++  P+  +  Y+  L+  +   W +A+  L
Sbjct: 492 ENPWTRFALARMYLRDGQIRNARALIDGLLKSQPNQPDALYTSTLLSAQLSEWKQAEATL 551

Query: 311 EELIQRESHVDSAHLNLGRIAEERND-----------PQAALL----------------- 342
             +   +   D   L       ++ D           P+A  L                 
Sbjct: 552 GRIPTAQRTADMNELATDIALHQQTDIAIETARRGQRPEALALLGRSEPLTRNKPERVAV 611

Query: 343 ---EYAQVGPG---------------NDYLPAQLRQADILMSNGRTDEAEKRLAAARDAE 384
               Y +VG                 N  +  +L  A++L+   +  EA + L   +  +
Sbjct: 612 LAAAYVEVGAAQYGLDMMQKVVENNPNPTVDQKLLYANVLLKANKYSEAGEILREVQ-GQ 670

Query: 385 P---------DYAIQLYLI-QAETLSANNQSERAWKLLQQALLQFPDD-LNLLYTRAMQA 433
           P         D  I LY + QA+ L   N    A+ +L  AL Q P+D L +     M A
Sbjct: 671 PLTETGRQRYDDLIYLYRVKQADALREKNDLVAAYDMLSPALAQRPNDALGVGALARMYA 730

Query: 434 EKRNDLAQMEKDLRLIIKRDPDNA---MALNALGYTLSDRTTRYAEAKVLIEQAHKLNPE 490
              N    ME    L I+++P+NA   + L  +    +DR      A+   ++A  L P 
Sbjct: 731 ASGNGKKAMELYAPL-IQQNPNNARLQLGLADIALKGNDR----GLAQSASDKALALEPG 785

Query: 491 DPAVLDSLGWVNYRLGNLDEAERLLRQAL 519
           +P +L S   +   LG   EA  LLR+AL
Sbjct: 786 NPEILTSAARIYQGLGKNSEAAELLRKAL 814



 Score = 39.7 bits (91), Expect = 8e-07
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)

Query: 468 SDRTTRYAEAKVLIEQAHKLNPEDPAVLDSLGWVNYRLGNLDEAERLLRQALERFP-DQE 526
           + R  R A+A+ L+ QA +LNP  P    +L     +    D+AE   R+ L R P D +
Sbjct: 360 AQRAGRSAQARDLVAQAERLNPGQPGAAIALAGFQAQDNQFDDAEAGYRKVLARHPGDPD 419

Query: 527 VAAHLGEVLWANGKQREARQI 547
             + L  VL  +G+  EA ++
Sbjct: 420 ALSGLINVLSQSGQPDEALKL 440



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 43/186 (23%), Positives = 68/186 (36%), Gaps = 20/186 (10%)

Query: 378 AAARDAEPDYAIQLYLIQAETLSANNQSERAWKLLQQALLQFPDDLNLLYTRAMQAEKRN 437
           + A  AE      L + Q     +    ERA +  Q+ L   PD  + LY   +   ++N
Sbjct: 16  STASVAETSDPQSLLIEQGYYWQSKKNPERALETWQKLLRLSPDQPDALYGIGLIQVQQN 75

Query: 438 DLAQMEKDLRLIIKRDPDNAMALNALGYTLSDRTTRYAEAKVLIEQAHKLNPEDPAVLDS 497
             A+ +K L  +    P    AL        D T    +   L+EQA +L   +      
Sbjct: 76  HPAEAQKYLARLQALSPVPRQALQ----LEQDITVAVPDNAKLLEQARELGEPE------ 125

Query: 498 LGWVNYRLGNLDEAERLLRQALE-RFPDQEVAAHLGEVLWANGK-QREARQIWEKFLKEQ 555
                      ++A  L RQ  + R P   +A      L    K   EA    ++  +E+
Sbjct: 126 --------AEREQAVALYRQIFQGRQPQGLIAREYYNTLGFTAKGSSEAIAGLQRLTRER 177

Query: 556 PESPIL 561
           P  PI+
Sbjct: 178 PNDPIV 183