Pairwise Alignments

Query, 574 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 658 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score = 60.1 bits (144), Expect = 3e-13
 Identities = 88/389 (22%), Positives = 162/389 (41%), Gaps = 46/389 (11%)

Query: 181 KHPKNSQLIFGKALLL---QQDDEADA-ALKLLEQNPPEEGEIAPILLRARLLQNLNRGK 236
           KHP    L   KAL L   ++ DEA A  + +L +NP            AR L  ++ GK
Sbjct: 19  KHPLQDLLDVRKALDLLDSRKTDEAKALCMAVLSRNPT-----LVFANHARGLVAMHEGK 73

Query: 237 --EAIPLLEKSIKKYPEDKRLRLTYARMLVEQDRMEDAKVQFASLVQQYPDDDELRYSLA 294
             +A   L K+I+  PE+       A  ++ QDR+++A   +   ++   D    R  LA
Sbjct: 74  FADAEAYLRKAIEADPENAEYMSNLAGTVLSQDRIDEAIALYEHAIRIDRDHRASRIGLA 133

Query: 295 LVCLEAKAWDEAKGYLEELIQRESHVDSAHLNLGRIAEERNDPQAALLEYAQVGPGNDYL 354
               E    + +  Y E+ ++RE +      +LGR          AL+E  +    N+ +
Sbjct: 134 NALHEKNDPEASVAYFEDAVKREPNAPGPLSHLGR----------ALIECKRY---NEAV 180

Query: 355 PAQLRQADILMSNGRTDEAEKRLAAARDAEPDYAIQLYLIQAETLSANNQSERAWKLLQQ 414
              L+  ++ +S   +  A          E  +A+++Y             + A +  + 
Sbjct: 181 AVILKSLELQISFAPSHTAL--------GEAFHAMEMY-------------KEAIESHKT 219

Query: 415 ALLQFPDDLNLLYTRAMQAEKRNDLAQMEKDLRLIIKRDPDNAMALNALGYTLSDRTTRY 474
           A+L  P D       A    K N + +  + L  +I+  P +  A   LG +    + R+
Sbjct: 220 AILLDPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIAPKDPNAYVKLGSSYFSTSDRF 279

Query: 475 AEAKVLIEQAHKLNPEDPAVLDSLGWVNYRLGNLDEAERLLRQALERFPDQEVAAH-LGE 533
            +A  +  +A +++ +     +++G + +  G+L++A    R+ALE  P+   A H +  
Sbjct: 280 DDAMRMFNKALEVDSKHALTYNNIGAIQHDHGDLEDAIGNFRKALELRPNYPTARHNIAL 339

Query: 534 VLWANGKQREARQIWEKFLKEQPESPILR 562
            L   G  +E  +  E  L  +  S + R
Sbjct: 340 SLLLQGHLKEGWECHESRLVTRERSHVYR 368



 Score = 34.3 bits (77), Expect = 2e-05
 Identities = 46/245 (18%), Positives = 96/245 (39%), Gaps = 10/245 (4%)

Query: 89  RAFRIAEYLGADQAALDTSLIWAKNAPDDLEAQRAAAVQLARAGRYDDSMIYMEKVLQGK 148
           +A  + +    D+A      + ++N P  + A  A  +     G++ D+  Y+ K ++  
Sbjct: 30  KALDLLDSRKTDEAKALCMAVLSRN-PTLVFANHARGLVAMHEGKFADAEAYLRKAIEAD 88

Query: 149 GDTHFDFLALSAADTDQDTRDGLMKSFDRLLQKHPKNSQLIFGKALLLQQDDEADAALKL 208
            +       L+     QD  D  +  ++  ++    +     G A  L + ++ +A++  
Sbjct: 89  PENAEYMSNLAGTVLSQDRIDEAIALYEHAIRIDRDHRASRIGLANALHEKNDPEASVAY 148

Query: 209 LEQNPPEEGEI-APILLRARLLQNLNRGKEAIPLLEKSIKKY----PEDKRLRLTYARML 263
            E     E     P+    R L    R  EA+ ++ KS++      P    L   +  M 
Sbjct: 149 FEDAVKREPNAPGPLSHLGRALIECKRYNEAVAVILKSLELQISFAPSHTALGEAFHAME 208

Query: 264 VEQDRMEDAKVQFASLVQQYPDDDELRYSLALVCLEAKAWDEAKGYLEELIQRESHVDSA 323
           + ++ +E  K    + +   P D      +A   L+    DEA  +L  +I+      +A
Sbjct: 209 MYKEAIESHK----TAILLDPQDTYAHNKIADSYLKLNRIDEAHEHLLRVIEIAPKDPNA 264

Query: 324 HLNLG 328
           ++ LG
Sbjct: 265 YVKLG 269